Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01625 and BSU09440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:38
# Commandline: needle
# -asequence dna-align/BSNT_01625___citA.1.22522.seq
# -bsequence dna-align/BSU09440___citA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01625___citA-BSU09440___citA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01625___citA-BSU09440___citA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01625___citA
# 2: BSU09440___citA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1101
# Identity: 1082/1101 (98.3%)
# Similarity: 1082/1101 (98.3%)
# Gaps: 0/1101 ( 0.0%)
# Score: 5334.0
#
#
#=======================================
BSNT_01625___ 1 ATGGTACATTACGGATTAAAGGGAATTACATGTGTAGAAACATCCATCAG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09440___ci 1 ATGGTACATTACGGATTAAAGGGAATTACATGTGTAGAAACATCCATCAG 50
BSNT_01625___ 51 CCATATTGATGGTGAAAAAGGGCGTCTGATTTACAGAGGACATCATGCAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09440___ci 51 CCATATTGATGGTGAAAAAGGGCGTCTGATTTACAGAGGACATCATGCAA 100
BSNT_01625___ 101 AAGACATCGCACTGAATCATAGCTTTGAAGAAGCGGCTTATTTGATTTTA 150
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU09440___ci 101 AAGACATCGCACTGAATCACAGCTTTGAAGAAGCGGCTTATTTGATTTTA 150
BSNT_01625___ 151 TTTGGAAAACGGCCTTCAACTGAAGAATTGCAGGTATTTAAAGATAAGCT 200
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU09440___ci 151 TTTGGAAAACTGCCTTCAACTGAAGAATTGCAGGTATTTAAAGATAAGCT 200
BSNT_01625___ 201 GGCTGCGGAACGGAATCTTCCGGAACATATTGAGCGCTTGATTCAATCAC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09440___ci 201 GGCTGCGGAACGGAATCTTCCGGAACATATTGAGCGCTTGATTCAATCAC 250
BSNT_01625___ 251 TGCCAAACAACATGGACGATATGTCGGTGCTGAGAACGGTTGTTTCAGCA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09440___ci 251 TGCCAAACAACATGGACGATATGTCGGTGCTGAGAACGGTTGTTTCAGCA 300
BSNT_01625___ 301 TTGGGGGAAAATACGTACACATTCCATCCGAAAACAGAAGAAGCAATCCG 350
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU09440___ci 301 TTGGGGGAAAATACGTACACATTCCATCCGAAAACAGAGGAAGCAATCCG 350
BSNT_01625___ 351 GCTGATTGCAATCACGGCTTCCATCATTGCATACAGAAAAAGATGGACGC 400
||||||||||||||||.||||.||||||||||||||||||||||||||||
BSU09440___ci 351 GCTGATTGCAATCACGCCTTCTATCATTGCATACAGAAAAAGATGGACGC 400
BSNT_01625___ 401 GCGGTGAACAAGCAATTGCACCTTCTTCCCAGTACGGACATGTCGAAAAC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09440___ci 401 GCGGTGAACAAGCAATTGCACCTTCTTCCCAGTACGGACATGTCGAAAAC 450
BSNT_01625___ 451 TACTATTATATGCTCACAGGCGAACAGCCTTCAGAGGCAAAAAAGAAAGC 500
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU09440___ci 451 TACTATTATATGCTCACAGGTGAACAGCCTTCAGAGGCAAAAAAGAAAGC 500
BSNT_01625___ 501 GCTTGAAACCTATATGATTCTGGCCATGGAGCACGGCATGAACGCATCGA 550
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU09440___ci 501 GCTTGAAACCTATATGATTCTGGCCACGGAGCACGGCATGAACGCATCGA 550
BSNT_01625___ 551 CTTTTTCGGCACGAGTCACGTTATCAACAGAGAGTGATTTAGTGTCAGCC 600
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU09440___ci 551 CTTTTTCGGCACGAGTCACGTTATCTACAGAGAGTGATTTAGTGTCAGCC 600
BSNT_01625___ 601 GTCACGGCTGCTCTCGGCACGATGAAAGGTCCGCTTCACGGAGGCGCTCC 650
|||||||||||||||||.|||||||||||||||||.||||||||.|||||
BSU09440___ci 601 GTCACGGCTGCTCTCGGTACGATGAAAGGTCCGCTGCACGGAGGTGCTCC 650
BSNT_01625___ 651 TTCTGCGGTGACAAAAATGCTTGAAGACATTGGAGAAAAAGAACATGCTG 700
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU09440___ci 651 TTCTGCGGTGACAAAAATGCTTGAAGACATTGGAGAAAAGGAACATGCTG 700
BSNT_01625___ 701 AAGCATATCTGAAAGAAAAACTCGAAAAAGGAGAGCGCTTGATGGGATTC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09440___ci 701 AAGCATATCTGAAAGAAAAACTCGAAAAAGGAGAGCGCTTGATGGGATTC 750
BSNT_01625___ 751 GGCCACAGGGTGTACAAAACAAAAGACCCGCGGGCAGAAGCTTTGAGACA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09440___ci 751 GGCCACAGGGTGTACAAAACAAAAGACCCGCGGGCAGAAGCTTTGAGACA 800
BSNT_01625___ 801 GAAAGCAGAACAGGTGGCCGGCAATGACCGTGATCTTGATCTTGCGCTGC 850
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU09440___ci 801 GAAAGCAGAAGAGGTGGCCGGCAATGACCGTGATCTTGATCTTGCGCTGC 850
BSNT_01625___ 851 ATGTAGAAGCAGAAGCGATTCGTTTACTAGAAATCTACAAACCGGGACGA 900
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU09440___ci 851 ATGTAGAAGCAGAAGCGATTCGTTTGCTAGAAATCTACAAACCGGGACGA 900
BSNT_01625___ 901 AAGCTGTACACAAATGTTGAATTTTACGCGGCTGCAGTGATGAAGGCCAT 950
|||||||||||||||||||||||||||||.|||||||||||||.||||||
BSU09440___ci 901 AAGCTGTACACAAATGTTGAATTTTACGCAGCTGCAGTGATGAGGGCCAT 950
BSNT_01625___ 951 CGATTTTGACGATGAGTTGTTTACTCCGACCTTTTCAGCAAGCCGAATGG 1000
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU09440___ci 951 CGATTTTGACGATGAATTGTTTACTCCGACCTTTTCAGCAAGCCGAATGG 1000
BSNT_01625___ 1001 TAGGGTGGTGCGCCCATGTGCTGGAACAGGCAGAAAACAACATGATTTTC 1050
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU09440___ci 1001 TAGGGTGGTGCGCCCATGTACTGGAACAGGCAGAAAACAACATGATTTTC 1050
BSNT_01625___ 1051 CGCCCGTCAGCGAAATATACCGGTGCCATTCCCGAGGAAGTTCTTTCATA 1100
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU09440___ci 1051 CGCCCGTCAGCGCAATATACCGGTGCCATTCCCGAGGAAGTTCTTTCATA 1100
BSNT_01625___ 1101 A 1101
|
BSU09440___ci 1101 A 1101
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