Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01622 and BSU09420

See Amino acid alignment / Visit BSNT_01622 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:37
# Commandline: needle
#    -asequence dna-align/BSNT_01622___lytE.1.22522.seq
#    -bsequence dna-align/BSU09420___lytE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01622___lytE-BSU09420___lytE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01622___lytE-BSU09420___lytE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01622___lytE
# 2: BSU09420___lytE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1005
# Identity:    1002/1005 (99.7%)
# Similarity:  1002/1005 (99.7%)
# Gaps:           0/1005 ( 0.0%)
# Score: 4998.0
# 
#
#=======================================

BSNT_01622___      1 ATGAAAAAGCAAATCATTACAGCTACGACAGCAGTTGTTTTAGGATCGAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly      1 ATGAAAAAGCAAATCATTACAGCTACGACAGCAGTTGTTTTAGGATCGAC     50

BSNT_01622___     51 GTTATTTGCAGGAGCGGCATCTGCACAAAGCATTAAGGTGAAAAAAGGCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly     51 GTTATTTGCAGGAGCGGCATCTGCACAAAGCATTAAGGTGAAAAAAGGCG    100

BSNT_01622___    101 ACACGTTATGGGATCTTTCAAGAAAATACGACACAACGATCAGTAAAATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    101 ACACGTTATGGGATCTTTCAAGAAAATACGACACAACGATCAGTAAAATT    150

BSNT_01622___    151 AAATCAGAGAACCACCTTCGTTCAGATATTATTTATGTGGGACAAACTTT    200
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU09420___ly    151 AAATCAGAGAACCACCTTCGTTCAGACATTATTTATGTGGGACAAACTTT    200

BSNT_01622___    201 ATCGATTAACGGCAAATCTACAAGTTCAAAAAGCAGCAGTTCTTCTTCCT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    201 ATCGATTAACGGCAAATCTACAAGTTCAAAAAGCAGCAGTTCTTCTTCCT    250

BSNT_01622___    251 CTTCTTCTACATACAAAGTAAAGAGCGGGGACAGCCTTTGGAAAATTTCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    251 CTTCTTCTACATACAAAGTAAAGAGCGGGGACAGCCTTTGGAAAATTTCA    300

BSNT_01622___    301 AAAAAATACGGCATGACAATCAATGAACTGAAGAAGCTGAATGGCTTAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    301 AAAAAATACGGCATGACAATCAATGAACTGAAGAAGCTGAATGGCTTAAA    350

BSNT_01622___    351 ATCAGATTTGCTTCGTGTTGGACAAGTCCTGAAACTGAAAGGTTCAACTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    351 ATCAGATTTGCTTCGTGTTGGACAAGTCCTGAAACTGAAAGGTTCAACTA    400

BSNT_01622___    401 GTTCAAGCAGCTCCAGCTCATCAAAAGTGTCATCGTCTTCAACTTCTACT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    401 GTTCAAGCAGCTCCAGCTCATCAAAAGTGTCATCGTCTTCAACTTCTACT    450

BSNT_01622___    451 TATAAAGTGAAGAGCGGAGACAGCCTTTCTAAAATTGCGAGCAAATACGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    451 TATAAAGTGAAGAGCGGAGACAGCCTTTCTAAAATTGCGAGCAAATACGG    500

BSNT_01622___    501 CACTACGGTTAGCAAATTAAAAAGCTTAAACGGCTTAAAATCAGATGTAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    501 CACTACGGTTAGCAAATTAAAAAGCTTAAACGGCTTAAAATCAGATGTAA    550

BSNT_01622___    551 TCTATGTCAACCAAGTATTGAAGGTGAAAGGAACAAGCACAAGCAGCTCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    551 TCTATGTCAACCAAGTATTGAAGGTGAAAGGAACAAGCACAAGCAGCTCA    600

BSNT_01622___    601 AAACCTGCTTCATCTTCATCGTCTTCAAGCAGCAAAACGTCATCTACATC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    601 AAACCTGCTTCATCTTCATCGTCTTCAAGCAGCAAAACGTCATCTACATC    650

BSNT_01622___    651 ACTTAATGTGAGCAAGCTGGTTTCTGATGCAAAAGCGTTAGTCGGAACGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    651 ACTTAATGTGAGCAAGCTGGTTTCTGATGCAAAAGCGTTAGTCGGAACGC    700

BSNT_01622___    701 CATACAAATGGGGCGGAACGACAACTTCCGGCTTTGACTGCAGCGGATTC    750
                     ||||.|||||||||||||||||||||||.|||||||||||||||||||||
BSU09420___ly    701 CATATAAATGGGGCGGAACGACAACTTCAGGCTTTGACTGCAGCGGATTC    750

BSNT_01622___    751 ATTTGGTACGTACTGAATAAACAAACAAGTGTGGGCAGAACAAGCACTGC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    751 ATTTGGTACGTACTGAATAAACAAACAAGTGTGGGCAGAACAAGCACTGC    800

BSNT_01622___    801 AGGATACTGGAGTTCTATGAAGAGCATTGCCAGCCCGTCTGTTGGTGATT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    801 AGGATACTGGAGTTCTATGAAGAGCATTGCCAGCCCGTCTGTTGGTGATT    850

BSNT_01622___    851 TCGTCTTCTTCACAACATATAAATCCGGCCCTTCTCACATGGGGATTTAC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    851 TCGTCTTCTTCACAACATATAAATCCGGCCCTTCTCACATGGGGATTTAC    900

BSNT_01622___    901 ATTGGAAACAACAGTTTCATTCATGCAGGATCTGACGGCGTACAAATCAG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    901 ATTGGAAACAACAGTTTCATTCATGCAGGATCTGACGGCGTACAAATCAG    950

BSNT_01622___    951 CAGCCTGAACAACAGCTACTGGAAGCCTCGTTACCTCGGTGCGAAAAGAT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09420___ly    951 CAGCCTGAACAACAGCTACTGGAAGCCTCGTTACCTCGGTGCGAAAAGAT   1000

BSNT_01622___   1001 TCTAA   1005
                     |||||
BSU09420___ly   1001 TCTAA   1005


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01622 and BSU09420

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
