Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01615 and BSU09380

See Amino acid alignment / Visit BSNT_01615 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:36
# Commandline: needle
#    -asequence dna-align/BSNT_01615___yhdE.1.22522.seq
#    -bsequence dna-align/BSU09380___nsrR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01615___yhdE-BSU09380___nsrR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01615___yhdE-BSU09380___nsrR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01615___yhdE
# 2: BSU09380___nsrR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity:     438/441 (99.3%)
# Similarity:   438/441 (99.3%)
# Gaps:           0/441 ( 0.0%)
# Score: 2178.0
# 
#
#=======================================

BSNT_01615___      1 ATGAAGTTAACCAATTATACAGATTATTCATTAAGAGTGTTGATTTTTCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09380___ns      1 ATGAAGTTAACCAATTATACAGATTATTCATTAAGAGTGTTGATTTTTCT     50

BSNT_01615___     51 GGCTGCAGAGCGTCCCGGAGAACTTTCAAATATAAAACAGATTGCCGAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09380___ns     51 GGCTGCAGAGCGTCCCGGAGAACTTTCAAATATAAAACAGATTGCCGAAA    100

BSNT_01615___    101 CGTATTCTATTTCAAAAAATCATCTCATGAAAGTCATATACAGGCTCGGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09380___ns    101 CGTATTCTATTTCAAAAAATCATCTCATGAAAGTCATATACAGGCTCGGC    150

BSNT_01615___    151 CAGCTCGGCTACGTAGAAACGATACGCGGACGGGGCGGCGGCATACGATT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09380___ns    151 CAGCTCGGCTACGTAGAAACGATACGCGGACGGGGCGGCGGCATACGATT    200

BSNT_01615___    201 AGGCATGGAACCTGAAGACATCAACATCGGTGAGGTTGTCAGAAAAACGG    250
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU09380___ns    201 AGGCATGGACCCTGAAGACATCAACATCGGTGAGGTTGTCAGAAAAACGG    250

BSNT_01615___    251 AGGACGATTTTAATATTGTTGAATGTTTTGATGCGAATAAGAATCTCTGT    300
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU09380___ns    251 AGGACGATTTTAATATTGTTGAATGTTTTGATGCGAACAAGAATCTCTGT    300

BSNT_01615___    301 GTTATTTCCCCGGTTTGCGGCTTAAAACATGTGCTGAATGAAGCGCTTTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09380___ns    301 GTTATTTCCCCGGTTTGCGGCTTAAAACATGTGCTGAATGAAGCGCTTTT    350

BSNT_01615___    351 GGCCTACCTCGCAGTTTTAGACAAATACACACTGCGCGACCTCGTCAAAA    400
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU09380___ns    351 AGCCTACCTCGCAGTTTTAGACAAATACACACTGCGCGACCTCGTCAAAA    400

BSNT_01615___    401 ACAAAGAAGATATCATGAAGCTTTTAAAAATGAAGGAATAG    441
                     |||||||||||||||||||||||||||||||||||||||||
BSU09380___ns    401 ACAAAGAAGATATCATGAAGCTTTTAAAAATGAAGGAATAG    441


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