Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01611 and BSU09360

See Amino acid alignment / Visit BSNT_01611 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:36
# Commandline: needle
#    -asequence dna-align/BSNT_01611___yhdC.1.22522.seq
#    -bsequence dna-align/BSU09360___yhdC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01611___yhdC-BSU09360___yhdC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01611___yhdC-BSU09360___yhdC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01611___yhdC
# 2: BSU09360___yhdC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity:     319/324 (98.5%)
# Similarity:   319/324 (98.5%)
# Gaps:           0/324 ( 0.0%)
# Score: 1575.0
# 
#
#=======================================

BSNT_01611___      1 ATGAAATCTCTGCCGTATACCATTGCGCTTCTTTTTTGCGGATTGATTAT     50
                     ||||||||.||||||||||||||.||.|||||||||||||||||||||||
BSU09360___yh      1 ATGAAATCCCTGCCGTATACCATCGCACTTCTTTTTTGCGGATTGATTAT     50

BSNT_01611___     51 CGTGTCAATGGCTGCAAAAGGTCATTCAACGGACACAAACGAGTCCGTTC    100
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU09360___yh     51 CGTGTCAATGGCTGCAAAAGGTCATTCAACGGACACAGACGAGTCCGTTC    100

BSNT_01611___    101 AAAAGTGGGAACAGCTTGCCTGGAGCAAAATTCAGGATGAATATAAGGGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09360___yh    101 AAAAGTGGGAACAGCTTGCCTGGAGCAAAATTCAGGATGAATATAAGGGC    150

BSNT_01611___    151 GCTTCATTTTCTGATTATGCTTATATGGGGCGTACAGAGGTGAATGATCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09360___yh    151 GCTTCATTTTCTGATTATGCTTATATGGGGCGTACAGAGGTGAATGATCA    200

BSNT_01611___    201 GCAGACGAAAGATGTCTTTCGGGTGACAGTCAGACAGAAAGATGACACTT    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU09360___yh    201 GCAGACTAAAGATGTCTTTCGGGTGACAGTCAGACAGAAAGATGACACTT    250

BSNT_01611___    251 TTTCTGTTCGGGCCGAAGTCTATTTTCATCCGGTGACAAATCATATGATC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09360___yh    251 TTTCTGTTCGGGCCGAAGTCTATTTTCATCCGGTGACAAATCATATGATC    300

BSNT_01611___    301 AGCATCAACGTCTTTAGGCTCTAA    324
                     ||||||||||||||||||||||||
BSU09360___yh    301 AGCATCAACGTCTTTAGGCTCTAA    324


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