Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01609 and BSU09340

See Amino acid alignment / Visit BSNT_01609 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:36
# Commandline: needle
#    -asequence dna-align/BSNT_01609___yhdA.1.22522.seq
#    -bsequence dna-align/BSU09340___yhdA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01609___yhdA-BSU09340___yhdA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01609___yhdA-BSU09340___yhdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01609___yhdA
# 2: BSU09340___yhdA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 525
# Identity:     520/525 (99.0%)
# Similarity:   520/525 (99.0%)
# Gaps:           0/525 ( 0.0%)
# Score: 2580.0
# 
#
#=======================================

BSNT_01609___      1 ATGAACATGTTAGTCATAAATGGCACGCCTAGAAAACATGGCAGAACAAG     50
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU09340___yh      1 ATGAACATGTTAGTCATAAATGGCACGCCAAGAAAACATGGCAGAACAAG     50

BSNT_01609___     51 AATTGCAGCATCCTATATTGCAGCTCTGTATCACACGGATTTGATTGATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09340___yh     51 AATTGCAGCATCCTATATTGCAGCTCTGTATCACACGGATTTGATTGATC    100

BSNT_01609___    101 TAAGCGAGTTTGTATTGCCCGTTTTTAACGGTGAAGCGGATCAATCTGAA    150
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU09340___yh    101 TAAGCGAGTTTGTATTGCCCGTTTTTAACGGTGAAGCGGAACAATCTGAA    150

BSNT_01609___    151 CTGTTGAAAGTACAGGAGCTTAAGAAACGCGTTACGAAAGCGGATGCGAT    200
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU09340___yh    151 CTGTTGAAAGTACAGGAGCTTAAGCAACGCGTTACGAAAGCGGATGCGAT    200

BSNT_01609___    201 TGTATTATTATCGCCTGAATATCACAGCGGCATGAGCGGCGCTTTAAAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09340___yh    201 TGTATTATTATCGCCTGAATATCACAGCGGCATGAGCGGCGCTTTAAAAA    250

BSNT_01609___    251 ATGCTTTGGATTTTCTAAGCAGCGAACAATTCAAATATAAGCCCGTTGCA    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU09340___yh    251 ATGCCTTGGATTTTCTAAGCAGCGAACAATTCAAATATAAGCCCGTTGCA    300

BSNT_01609___    301 TTATTGGCAGTAGCGGGAGGCGGAAAAGGCGGCATCAATGCGCTGAACAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09340___yh    301 TTATTGGCAGTAGCGGGAGGCGGAAAAGGCGGCATCAATGCGCTGAACAA    350

BSNT_01609___    351 TATGAGAACTGTGATGCGGGGTGTCTACGCCAATGTCATTCCGAAGCAGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09340___yh    351 TATGAGAACTGTGATGCGGGGTGTCTACGCCAATGTCATTCCGAAGCAGC    400

BSNT_01609___    401 TGGTGCTTGATCCGGTGCATATTGATGTTGAAAATGCTACAGTGGCTGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09340___yh    401 TGGTGCTTGATCCGGTGCATATTGATGTTGAAAATGCTACAGTGGCTGAA    450

BSNT_01609___    451 AACATTAAGGAAAGCATAAAAGAGCTTGTCGAAGAACTCAGCATGTTCGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09340___yh    451 AACATTAAGGAAAGCATAAAAGAGCTTGTCGAAGAACTCAGCATGTTCGC    500

BSNT_01609___    501 AAAAACAGGAAATCCCGGCGTCTAA    525
                     ||||.||||||||||||||||||||
BSU09340___yh    501 AAAAGCAGGAAATCCCGGCGTCTAA    525


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