Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01586 and BSU09200

See Amino acid alignment / Visit BSNT_01586 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:33
# Commandline: needle
#    -asequence dna-align/BSNT_01586___yhcS.1.22522.seq
#    -bsequence dna-align/BSU09200___yhcS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01586___yhcS-BSU09200___yhcS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01586___yhcS-BSU09200___yhcS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01586___yhcS
# 2: BSU09200___yhcS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 597
# Identity:     585/597 (98.0%)
# Similarity:   585/597 (98.0%)
# Gaps:           0/597 ( 0.0%)
# Score: 2877.0
# 
#
#=======================================

BSNT_01586___      1 GTGAAAAAAGTTATTCCACTATTCATCATTGCTGCCGGCCTAGTGATCGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09200___yh      1 GTGAAAAAAGTTATTCCACTATTCATCATTGCTGCCGGCCTAGTGATCGC     50

BSNT_01586___     51 AGGCTATGGAGGCTTTAAATTGATCGATACGAATATGAAAACGGAACAGA    100
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU09200___yh     51 AGGCTATGGAGGCTTTAAATTGATCGATACGAATACGAAAACGGAACAGA    100

BSNT_01586___    101 CACTAAAAGAAGCAAAACTTGCGGCTGAAAAGCCGCAGGAACCTTTGGGG    150
                     ||.|||||||||||||.||.||||||.||||||||||||||.|||.||||
BSU09200___yh    101 CATTAAAAGAAGCAAAGCTGGCGGCTAAAAAGCCGCAGGAAGCTTCGGGG    150

BSNT_01586___    151 ACGAAAAATAGCACAGATCAAGCAAAGAACAAAGCATCATTTAAGCCTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09200___yh    151 ACGAAAAATAGCACAGATCAAGCAAAGAACAAAGCATCATTTAAGCCTGA    200

BSNT_01586___    201 GACCGGACAAGCGAGCGGCATTTTAGAAATACCGAAAATCAATGCAGAGC    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU09200___yh    201 GACCGGCCAAGCGAGCGGCATTTTAGAAATACCGAAAATCAATGCAGAGC    250

BSNT_01586___    251 TTCCGATCGTGGAGGGCACCGATGCTAATGATTTAGAAAAAGGTGTCGGG    300
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU09200___yh    251 TTCCGATCGTGGAGGGCACCGATGCTGATGATTTAGAAAAAGGTGTCGGG    300

BSNT_01586___    301 CATTACAAGGACAGCTATTATCCTGATGAAAACGGACAAATTGTGCTGTC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09200___yh    301 CATTACAAGGACAGCTATTATCCTGATGAAAACGGACAAATTGTGCTGTC    350

BSNT_01586___    351 AGGGCATCGGGATACCGTGTTTCGCCGGACGGGAGAGCTGGAAAAGGGGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09200___yh    351 AGGGCATCGGGATACCGTGTTTCGCCGGACGGGAGAGCTGGAAAAGGGGG    400

BSNT_01586___    401 ATCGGCTCCGCATTCTCCTGTCATATGGAGAATTCACATATGAAATTGTA    450
                     |||.||||||..||||||||||||||||||||||||||||||||||||||
BSU09200___yh    401 ATCAGCTCCGTCTTCTCCTGTCATATGGAGAATTCACATATGAAATTGTA    450

BSNT_01586___    451 AAAACAAAAATTGTCGATAAGGATGACACATCTATTATCACGCTCCAGCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09200___yh    451 AAAACAAAAATTGTCGATAAGGATGACACATCTATTATCACGCTCCAGCA    500

BSNT_01586___    501 TGAAAAGGAAGAGCTGATTCTGACGACCTGCTATCCGTTTTCATACGTCG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09200___yh    501 TGAAAAGGAAGAGCTGATTCTGACGACCTGCTATCCGTTTTCATACGTCG    550

BSNT_01586___    551 GAAATGCCCCGAAGCGCTATATTATATATGGAAAACGAGTGACTTAA    597
                     |||||||||||||||||||||||||||||||||||||||||||||||
BSU09200___yh    551 GAAATGCCCCGAAGCGCTATATTATATATGGAAAACGAGTGACTTAA    597


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