Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01583 and BSU09165

See Amino acid alignment / Visit BSNT_01583 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:31
# Commandline: needle
#    -asequence dna-align/BSNT_01583.1.22522.seq
#    -bsequence dna-align/BSU09165___yhcO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01583-BSU09165___yhcO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01583-BSU09165___yhcO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01583
# 2: BSU09165___yhcO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1014
# Identity:     966/1014 (95.3%)
# Similarity:   966/1014 (95.3%)
# Gaps:          45/1014 ( 4.4%)
# Score: 4804.5
# 
#
#=======================================

BSNT_01583         1 TTGCGGGATGGCATAGGAAAGCGTGCGGCATCCGCTCTATTCCTGTGCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh      1 TTGCGGGATGGCATAGGAAAGCGTGCGGCATCCGCTCTATTCCTGTGCGG     50

BSNT_01583        51 AGTCCTTGTGATGCTGGCTGTAAGCTCAGCCATCGTATCAAGCGCGATGT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh     51 AGTCCTTGTGATGCTGGCTGTAAGCTCAGCCATCGTATCAAGCGCGATGT    100

BSNT_01583       101 ATATCCTGTCTTTTCCAGGTCAGGCATCTGGAATAACAAAAGAACAAGTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh    101 ATATCCTGTCTTTTCCAGGTCAGGCATCTGGAATAACAAAAGAACAAGTG    150

BSNT_01583       151 ACGAAGCACATGAAGAAAGAGTCATTCAAACAGGCCGATATTTATTACAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh    151 ACGAAGCACATGAAGAAAGAGTCATTCAAACAGGCCGATATTTATTACAC    200

BSNT_01583       201 TTCTAAGGAAAAGTCCTTACTGCCATTGACGAAAGAAACGCTTGAATATG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh    201 TTCTAAGGAAAAGTCCTTACTGCCATTGACGAAAGAAACGCTTGAATATG    250

BSNT_01583       251 CAGTCAGTATTAATCAGATTATGATTGGATATTCGAATCAAAAGCCTATT    300
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh    251 CGGTCAGTATTAATCAGATTATGATTGGATATTCGAATCAAAAGCCTATT    300

BSNT_01583       301 GACATTATTTTTTTTCCTAATGAAAAACAGATGGAGGCTTACTCCGGTTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh    301 GACATTATTTTTTTTCCTAATGAAAAACAGATGGAGGCTTACTCCGGTTT    350

BSNT_01583       351 ATTGGATGTAGTTGGTTTTTATTCTGAACGGGAGCAGCTGATCGGATTGT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh    351 ATTGGATGTAGTTGGTTTTTATTCTGAACGGGAGCAGCTGATCGGATTGT    400

BSNT_01583       401 TGCCTGAAGAGAAAAAGAAACTGTTAGAAGGGGACGAGGTAGCGGTTTAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh    401 TGCCTGAAGAGAAAAAGAAACTGTTAGAAGGGGACGAGGTAGCGGTTTAT    450

BSNT_01583       451 TTGTACCAGAGATTGTTGATTCATGAATACTCGCACCATGCGTTTCACCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh    451 TTGTACCAGAGATTGTTGATTCATGAATACTCGCACCATGCGTTTCACCA    500

BSNT_01583       501 GAAATTGAAGGAGCTTGAGACGGATCCCGATGAGTTTCCGTTATGGTTTC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh    501 GAAATTGAAGGAGCTTGAGACGGATCCCGATGAGTTTCCGTTATGGTTTC    550

BSNT_01583       551 ATGAAGGGTTAAGCGAGTGGATTGCGAACTATGAATTGCTCATAGATCCG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh    551 ATGAAGGGTTAAGCGAGTGGATTGCGAACTATGAATTGCTCATAGATCCG    600

BSNT_01583       601 ATCACGTTTTCTGTCGTGCCCTTTGACCGTTTGCAGACTGATCGAGACTG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh    601 ATCACGTTTTCTGTCGTGCCCTTTGACCGTTTGCAGACTGATCGAGACTG    650

BSNT_01583       651 GCAGGAAGCTAGAGCCGAATATGACACTGATGTCTATTTGCAAAGCTTTT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh    651 GCAGGAAGCTAGAGCCGAATATGACACTGATGTCTATTTGCAAAGCTTTT    700

BSNT_01583       701 ATATGATCGATGAGCTGACGGACAAATACGGGAAAGATATTATTTCAGAA    750
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU09165___yh    701 ATATGATCGATGAGCTGACGGACAAATACGGGAAAGACATTATTTCAGAA    750

BSNT_01583       751 ATGATTAAGGAAACGGCAAAAAAAGGGGACTTTGAAAAAGGGTTTAAATC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh    751 ATGATTAAGGAAACGGCAAAAAAAGGGGACTTTGAAAAAGGGTTTAAATC    800

BSNT_01583       801 AGCAACAAAGGAATGTCTTGATCAATTTGAAAAAGATTTTAAGAAAAAAT    850
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU09165___yh    801 AGCAACAAAGGAAAGTCTTGATCAATTTGAAAAAGATTTTAAGAAAAAAT    850

BSNT_01583       851 TTGAAAAAAACAGTGCGGCATTGGATAGTATCTATCCAATGCCTTTGTTA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09165___yh    851 TTGAAAAAAACAGTGCGGCATTGGATAGTATCTATCCAATGCCTTTGTTA    900

BSNT_01583       901 TTAGTGAAGTCCTTGCTGACCCATTCCGCCATTCCGACTTGTGTCGGAGG    950
                     |||||||||||||||||||||||||||||        |||||||||||||
BSU09165___yh    901 TTAGTGAAGTCCTTGCTGACCCATTCCGC--------CTTGTGTCGGAGG    942

BSNT_01583       951 CATTTGTCCTTGGGCAGGGGCGAATGAATTTCGCAGCTGTTCCATATCCT   1000
                     |||||||||||||||||||||||||||                       
BSU09165___yh    943 CATTTGTCCTTGGGCAGGGGCGAATGA-----------------------    969

BSNT_01583      1001 GCGCATCAAGCTGA   1014
                                   
BSU09165___yh    969 --------------    969


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01583 and BSU09165

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
