Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01581 and BSU09140
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:31
# Commandline: needle
# -asequence dna-align/BSNT_01581___yhcM.1.22522.seq
# -bsequence dna-align/BSU09140___yhcM.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01581___yhcM-BSU09140___yhcM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01581___yhcM-BSU09140___yhcM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01581___yhcM
# 2: BSU09140___yhcM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity: 437/456 (95.8%)
# Similarity: 437/456 (95.8%)
# Gaps: 9/456 ( 2.0%)
# Score: 2121.5
#
#
#=======================================
BSNT_01581___ 1 ATGTTGTTCAACCAGCGAAGAGGAATCAGCCCCACAGCATTGATCATAGG 50
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU09140___yh 1 ATGTTGTTCAACCAGCGAAGAGGAATCAGCCCCGCAGCATTGATCATAGG 50
BSNT_01581___ 51 ATCAACTATGCTTATTGCTGCATTATCACCTCAGATCCGCCACAGAATCA 100
||||||||||||||||.|||||||||||||||||||||||||.|||||||
BSU09140___yh 51 ATCAACTATGCTTATTACTGCATTATCACCTCAGATCCGCCAAAGAATCA 100
BSNT_01581___ 101 GCGGGTTTATCACAGGACAAATGAACAGACGAAATTCAGAAAATAACACG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09140___yh 101 GCGGGTTTATCACAGGACAAATGAACAGACGAAATTCAGAAAATAACACG 150
BSNT_01581___ 151 TTTGATGCTTCTAATGTAGGAAACATAGTCAAACAAGCATTTAGCG---- 196
||||||||||||||||||||||||||.|||||||||||||||||||
BSU09140___yh 151 TTTGATGCTTCTAATGTAGGAAACATGGTCAAACAAGCATTTAGCGGAAG 200
BSNT_01581___ 197 --GCG---GCAGCGGTGATAACCAGGACCGTTCGCAGAATCAAAGCCAGC 241
||| |||||||||||||||||||||||||||||.||||||||||||
BSU09140___yh 201 CAGCGGAAGCAGCGGTGATAACCAGGACCGTTCGCAGCATCAAAGCCAGC 250
BSNT_01581___ 242 GGCAAAATGGCCGTCAGCACCAGCACGCAGGACAGCAGCAACCACAGCAT 291
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU09140___yh 251 GGCAAAATGGCCGTCAGCACCAGCACGCTGGACAGCAGCAACCACAGCAT 300
BSNT_01581___ 292 CAGCATACACAGTCTCAAACTAGGCAAACTGAGACTGCCGCGAAAAAAAG 341
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU09140___yh 301 CAGCATACACAGTCTCAAACTAGGCAAACTGAGACAGCCGCGAAAAAAAG 350
BSNT_01581___ 342 ACAGCCGCATTATGCTGAACCCATTCATTTTGAACAAAGCGCAATGAATG 391
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU09140___yh 351 ACAGCCGCATTATGCTGAACCCATTCATTTTGAACAAAACGCAATGAATG 400
BSNT_01581___ 392 TCATGGACGACAACACGATGATGGAAATGCTGGAGGACTTAGAACCCGGC 441
|||||||||||||||||||||||||||||||||||||||||||.||.|||
BSU09140___yh 401 TCATGGACGACAACACGATGATGGAAATGCTGGAGGACTTAGAGCCTGGC 450
BSNT_01581___ 442 CGTTAA 447
||||||
BSU09140___yh 451 CGTTAA 456
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