Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01540 and BSU09110

See Amino acid alignment / Visit BSNT_01540 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:30
# Commandline: needle
#    -asequence dna-align/BSNT_01540___yhcJ.1.22522.seq
#    -bsequence dna-align/BSU09110___yhcJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01540___yhcJ-BSU09110___yhcJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01540___yhcJ-BSU09110___yhcJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01540___yhcJ
# 2: BSU09110___yhcJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 831
# Identity:     819/831 (98.6%)
# Similarity:   819/831 (98.6%)
# Gaps:           0/831 ( 0.0%)
# Score: 4047.0
# 
#
#=======================================

BSNT_01540___      1 ATGAAAAAGTGGCTTATATGCAGTTTTGTCCTTGTTCTTCTCGTTTCATT     50
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU09110___yh      1 ATGAAAAAGTGGCTTATATGCAGTTTCGTCCTTGTTCTTCTCGTTTCATT     50

BSNT_01540___     51 TACTGCATGTTCACCGTCTGCAGAACATGAATCGATAAAAATCGGGATTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09110___yh     51 TACTGCATGTTCACCGTCTGCAGAACATGAATCGATAAAAATCGGGATTG    100

BSNT_01540___    101 CTGAGTCTGACGGGGCAATATGGAACTATATTGCTCAAAAGGCTGAAGAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09110___yh    101 CTGAGTCTGACGGGGCAATATGGAACTATATTGCTCAAAAGGCTGAAGAG    150

BSNT_01540___    151 GCAGGGCTGGATATTCAGCTGATCCCTTTTTCTGATTATGCGGAGTCTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09110___yh    151 GCAGGGCTGGATATTCAGCTGATCCCTTTTTCTGATTATGCGGAGTCTGA    200

BSNT_01540___    201 TATCGCACTTGCTAACAAAGAAATTGATGCCAACGCCTTTCAAACCATTT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09110___yh    201 TATCGCACTTGCTAACAAAGAAATTGATGCCAACGCCTTTCAAACCATTT    250

BSNT_01540___    251 CATATTTTCAGTCGTTCACTCAAAAATACAAACTTAATTTGGCACCGCTC    300
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU09110___yh    251 CATATTTTCAGTCGTTCACTGAAAAATACAAACTTAATTTGGCACCGCTC    300

BSNT_01540___    301 GGAACGACTTACATAACGCCCATGGGCATTTATTCAAAACGATATGACCG    350
                     ||.|||||.||||||||||||||||||||||||||||||||||||||.||
BSU09110___yh    301 GGGACGACATACATAACGCCCATGGGCATTTATTCAAAACGATATGAACG    350

BSNT_01540___    351 AATCCGAGATATACCGCGAGGAGCTGTCGTTTCTGTTCCGGATAAAGCGT    400
                     |||||||||||||.||||.|||||||||||||||||||||||||||||||
BSU09110___yh    351 AATCCGAGATATATCGCGGGGAGCTGTCGTTTCTGTTCCGGATAAAGCGT    400

BSNT_01540___    401 TCGATTTTGGCAGGGCGCTTACGGTGCTCCAGGAAGCGGGTTTGCTAACG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09110___yh    401 TCGATTTTGGCAGGGCGCTTACGGTGCTCCAGGAAGCGGGTTTGCTAACG    450

BSNT_01540___    451 CTGAAAAACGGATTTAACGGAACAGGTTCAGTTGATATGATTAAAGATAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09110___yh    451 CTGAAAAACGGATTTAACGGAACAGGTTCAGTTGATATGATTAAAGATAA    500

BSNT_01540___    501 TCCGAGACACCTGAAATTAAAAGCTGTCCGGCAACAGGATGCAGTAAGCG    550
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU09110___yh    501 TCCGAGACACCTGAAATTAAAAGCTGTCCGGCAACAGGATGCAGTGAGCG    550

BSNT_01540___    551 GTGCCGACGTGTTTGTCATGAAACCATCAGAAGCAAAAAAAGCGGGCCTG    600
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU09110___yh    551 GTGCCGACGTGTTTGTCATGAAACCATCAGAAGCAAAAAAAGCGGGCTTG    600

BSNT_01540___    601 AACCCGAAAAAGCATACGCTAAAGAGCGGCGGACCCATGTCTGGGGAAGA    650
                     ||||||||||||||||||||||||||||||||||.||||||||.||||||
BSU09110___yh    601 AACCCGAAAAAGCATACGCTAAAGAGCGGCGGACTCATGTCTGAGGAAGA    650

BSNT_01540___    651 GATGAATTTGATTGTTGTCAGAGCGGAGGATCAAGATCGGGAAGCGCTGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09110___yh    651 GATGAATTTGATTGTTGTCAGAGCGGAGGATCAAGATCGGGAAGCGCTGC    700

BSNT_01540___    701 AAACCATTCTTGAGCTTTATCAAGCTGATGATACAGCGGCATTTATAGAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09110___yh    701 AAACCATTCTTGAGCTTTATCAAGCTGATGATACAGCGGCATTTATAGAA    750

BSNT_01540___    751 AAAGAATACCAGGGAGATCTTGTCCCGGCTTTTCTGCCTTTGAAACGTCT    800
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU09110___yh    751 AAAGAATATCAGGGAGATCTTGTCCCGGCTTTTCTGCCTTTGAAACGTCT    800

BSNT_01540___    801 TTCAGATTGGAAGAATGAATTCGAACATTGA    831
                     |||||||||||||||||||||||||||||||
BSU09110___yh    801 TTCAGATTGGAAGAATGAATTCGAACATTGA    831


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