Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_01537 and BSU09080

See Amino acid alignment / Visit BSNT_01537 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:30
# Commandline: needle
#    -asequence dna-align/BSNT_01537___yhcH.1.22522.seq
#    -bsequence dna-align/BSU09080___yhcH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01537___yhcH-BSU09080___yhcH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01537___yhcH-BSU09080___yhcH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01537___yhcH
# 2: BSU09080___yhcH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 918
# Identity:     910/918 (99.1%)
# Similarity:   910/918 (99.1%)
# Gaps:           0/918 ( 0.0%)
# Score: 4518.0
# 
#
#=======================================

BSNT_01537___      1 ATGAAAACAGTGTTGGAATTGAAAAACGTGACTAAAAACATCAGAGGCCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09080___yh      1 ATGAAAACAGTGTTGGAATTGAAAAACGTGACTAAAAACATCAGAGGCCG     50

BSNT_01537___     51 AACGATCATTAATGATCTCAGTTTTACGATTCGTGAAGGCGAGGTATTCG    100
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU09080___yh     51 AACGATCATTGATGATCTCAGTTTTACGATTCGTGAAGGCGAGGTATTCG    100

BSNT_01537___    101 GTTTTTTAGGACCAAACGGAGCGGGGAAAACGACAACCATCCGGATGATG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09080___yh    101 GTTTTTTAGGACCAAACGGAGCGGGGAAAACGACAACCATCCGGATGATG    150

BSNT_01537___    151 GTGGGGTTAATGAAGCTGTCGAAAGGTGATGTCCTCATTTGCGGCCAATC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09080___yh    151 GTGGGGTTAATGAAGCTGTCGAAAGGTGATGTCCTCATTTGCGGCCAATC    200

BSNT_01537___    201 AATTACGAAAGAATATGCCAAGGCGATTAAGCATATTGGAGCGATCGTTG    250
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU09080___yh    201 AATTACGAAAGAATATGCCAAGGCGATTAAGCATATCGGAGCGATCGTTG    250

BSNT_01537___    251 AGAATCCCGAGCTGTATAAATTTTTGAGCGGATATAAAAATCTCCAGCAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09080___yh    251 AGAATCCCGAGCTGTATAAATTTTTGAGCGGATATAAAAATCTCCAGCAA    300

BSNT_01537___    301 TACGCAAGGATGGTCAAGGGTGTCACGAAGGAAAAAATTGATGAAGTTGT    350
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU09080___yh    301 TTCGCAAGGATGGTCAAGGGTGTCACGAAGGAAAAAATTGATGAAGTTGT    350

BSNT_01537___    351 TGAACTGGTCGGTTTAACAGACAGAATCCACGACAAGGTGAAAACATATT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09080___yh    351 TGAACTGGTCGGTTTAACAGACAGAATCCACGACAAGGTGAAAACATATT    400

BSNT_01537___    401 CTCTGGGGATGAGACAGCGTCTTGGCTTGGCACAATGCCTTCTGCACGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09080___yh    401 CTCTGGGGATGAGACAGCGTCTTGGCTTGGCACAATGCCTTCTGCACGAT    450

BSNT_01537___    451 CCGAAAGTGCTGATTTTGGATGAACCGACAAACGGCCTTGATCCGGCGGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09080___yh    451 CCGAAAGTGCTGATTTTGGATGAACCGACAAACGGCCTTGATCCGGCGGG    500

BSNT_01537___    501 GATCAGAGAAATCAGAGATCATTTAAAGAAGCTGACCCGAGAAAGAGGAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09080___yh    501 GATCAGAGAAATCAGAGATCATTTAAAGAAGCTGACCCGAGAAAGAGGAA    550

BSNT_01537___    551 TGGCTGTCATCGTTTCAAGCCACCTGCTGTCAGAAATGGAACTGATGTGT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09080___yh    551 TGGCTGTCATCGTTTCAAGCCACCTGCTGTCAGAAATGGAACTGATGTGT    600

BSNT_01537___    601 GATCGAATTGCGATTCTGCAAAAAGGAAAGCTGATCGATATTCAAAATGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09080___yh    601 GATCGAATTGCGATTCTGCAAAAAGGAAAGCTGATCGATATTCAAAATGT    650

BSNT_01537___    651 AAAAGATGAAAACATTGATGAGAACGATACATATTTCTTCCAGGTTGAGC    700
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU09080___yh    651 AAAAGATGAAAACATTGATGAGAATGATACATATTTCTTCCAGGTTGAGC    700

BSNT_01537___    701 AGCCGAATGAAGCCGCTGCTGTTTTAAATCAGTACGATTTGCTGAGTAAG    750
                     ||||||.||||||||||.||||||||||||||||||||||||||||||||
BSU09080___yh    701 AGCCGAGTGAAGCCGCTACTGTTTTAAATCAGTACGATTTGCTGAGTAAG    750

BSNT_01537___    751 ACAAATGGTGTAGAAATCAAACTGGCTAAAGACGAAGTCCCTGCGGTTAT    800
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU09080___yh    751 ACAAATGGTGTAGAAATCAAACTGGCTAAAGAGGAAGTCCCTGCGGTTAT    800

BSNT_01537___    801 TGAATTGCTGGTGATGCAGCAAATCCGTATTTATGAGGTCAAGGTTATAA    850
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU09080___yh    801 TGAATTGCTGGTGATGCAGCAAATCCGTATTTATGAGGTCAAGGTCATAA    850

BSNT_01537___    851 CAAAATCATTAGAGGACCGTTTCTTAGAAATGACAGGTGAAACAAAAGAG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09080___yh    851 CAAAATCATTAGAGGACCGTTTCTTAGAAATGACAGGTGAAACAAAAGAG    900

BSNT_01537___    901 GAGGTTCAGCATGCTTAA    918
                     ||||||||||||||||||
BSU09080___yh    901 GAGGTTCAGCATGCTTAA    918


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.