Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01535 and BSU09060

See Amino acid alignment / Visit BSNT_01535 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:29
# Commandline: needle
#    -asequence dna-align/BSNT_01535___yhcF.1.22522.seq
#    -bsequence dna-align/BSU09060___yhcF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01535___yhcF-BSU09060___yhcF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01535___yhcF-BSU09060___yhcF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01535___yhcF
# 2: BSU09060___yhcF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 366
# Identity:     361/366 (98.6%)
# Similarity:   361/366 (98.6%)
# Gaps:           0/366 ( 0.0%)
# Score: 1785.0
# 
#
#=======================================

BSNT_01535___      1 ATGGACAATCAATTCCAATCCTCGAAACCGATTTATCTGCAGATCGCTGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09060___yh      1 ATGGACAATCAATTCCAATCCTCGAAACCGATTTATCTGCAGATCGCTGA     50

BSNT_01535___     51 TCAGATCTTTTATAGGCTGGTCAGGAAGGAGCTGCTCCCAGGAGACAAGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09060___yh     51 TCAGATCTTTTATAGGCTGGTCAGGAAGGAGCTGCTCCCAGGAGACAAGC    100

BSNT_01535___    101 TTCCTTCAGTAAGAGAAATGGCGATTCAAACTAAGGTAAATCCCAATACA    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU09060___yh    101 TTCCTTCAGTAAGAGAAATGGCGATTCAAACTAAAGTAAATCCCAATACA    150

BSNT_01535___    151 ATTCAAAGAACGTACAGTGAGATGGAAAGGCTGGGTATTGTGGAGACAAG    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU09060___yh    151 ATTCAAAGAACTTACAGTGAGATGGAAAGGCTGGGTATTGTGGAGACAAG    200

BSNT_01535___    201 AAGAGGTCAAGGGACGTTTATTACGGAAAAAGCAGAAATCGTAGACGAGC    250
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU09060___yh    201 AAGAGGTCAAGGGACGTTTATTGCGGAAAAAGCAGAAATCGTAGACGAGC    250

BSNT_01535___    251 TGAAAGACAAGCTGACACGAGAGGTGCTGGAAGGCTTTGTCAAGCAAATG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09060___yh    251 TGAAAGACAAGCTGACACGAGAGGTGCTGGAAGGCTTTGTCAAGCAAATG    300

BSNT_01535___    301 AAAGAGCTGGGGCTAACGAAAGAGGAAATGGTAGAAGGGATTAAAACATT    350
                     |||||||||||||||||||||||.||||||.|||||||||||||||||||
BSU09060___yh    301 AAAGAGCTGGGGCTAACGAAAGAAGAAATGTTAGAAGGGATTAAAACATT    350

BSNT_01535___    351 CACAGAGGGAGGCTAA    366
                     ||||||||||||||||
BSU09060___yh    351 CACAGAGGGAGGCTAA    366


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