Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01534 and BSU09050

See Amino acid alignment / Visit BSNT_01534 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:29
# Commandline: needle
#    -asequence dna-align/BSNT_01534___yhcE.1.22522.seq
#    -bsequence dna-align/BSU09050___yhcE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01534___yhcE-BSU09050___yhcE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01534___yhcE-BSU09050___yhcE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01534___yhcE
# 2: BSU09050___yhcE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 762
# Identity:     754/762 (99.0%)
# Similarity:   754/762 (99.0%)
# Gaps:           0/762 ( 0.0%)
# Score: 3738.0
# 
#
#=======================================

BSNT_01534___      1 ATGAATTCTTTTTTAGGTTTATTAAAGAAAGATATCAAGCTTTCAAGAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09050___yh      1 ATGAATTCTTTTTTAGGTTTATTAAAGAAAGATATCAAGCTTTCAAGAAT     50

BSNT_01534___     51 GTGGCTGCTATTATGGATATGCGGAATCATTTTCTTATTGGGAACAGGCC    100
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU09050___yh     51 GTGGCTGCTAGTATGGATATGCGGAATCATTTTCTTATTGGGAACAGGCC    100

BSNT_01534___    101 ATATTATAGCTTCTCGCACGAAAGAACCTCTAGTCATTTTTGGTTTTTTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09050___yh    101 ATATTATAGCTTCTCGCACGAAAGAACCTCTAGTCATTTTTGGTTTTTTT    150

BSNT_01534___    151 GTTGCAGTTGCTTTTTTTCTGCTTTTCTTATCTCCTGTTTTTGTGTTTTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU09050___yh    151 GTTGCAGTTGCTTTTTTTCTGCTTTTCTTATCTCCTGTTTTTGTTTTTTA    200

BSNT_01534___    201 TCACCTTCGCAAGGAAGGGAAATCACAGCTTTGGCTGTACAATCCAAATG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09050___yh    201 TCACCTTCGCAAGGAAGGGAAATCACAGCTTTGGCTGTACAATCCAAATG    250

BSNT_01534___    251 GCGGCTTATGGCTGTTTTCTTCTAAATTGGCAGCATCTTTGCTCTATCAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09050___yh    251 GCGGCTTATGGCTGTTTTCTTCTAAATTGGCAGCATCTTTGCTCTATCAA    300

BSNT_01534___    301 TTTGTGATTCAGTTGGCATTAACAGCCTATGGCATATGGATGTATCATAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09050___yh    301 TTTGTGATTCAGTTGGCATTAACAGCCTATGGCATATGGATGTATCATAT    350

BSNT_01534___    351 GCTCTCTGTAAAAAATCTGCTGGAGCATCAAGTTGATATAACGAGTACAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09050___yh    351 GCTCTCTGTAAAAAATCTGCTGGAGCATCAAGTTGATATAACGAGTACAG    400

BSNT_01534___    401 TGGCTTTGCTGAATATGTATGGGCTTATTTCTTCGTTAGATATGTCAGTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09050___yh    401 TGGCTTTGCTGAATATGTATGGGCTTATTTCTTCGTTAGATATGTCAGTA    450

BSNT_01534___    451 ACAGTCATTGTGTTTTGGACTGTTTTTCACTCTCTCAGAAATTGGCGCGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09050___yh    451 ACAGTCATTGTGTTTTGGACTGTTTTTCACTCTCTCAGAAATTGGCGCGG    500

BSNT_01534___    501 AATGCGGTGGGCTGCGATGGTTCTGTTGGTTGCAGTGTGGTTATTCTTCG    550
                     ||||||||||||||||||||||||||||||.|||.|||||||||||||||
BSU09050___yh    501 AATGCGGTGGGCTGCGATGGTTCTGTTGGTCGCAATGTGGTTATTCTTCG    550

BSNT_01534___    551 ATGAATACATCATAAGCCCTTTGGTTGAATCTCAAAAGCATTTCTGGCCG    600
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU09050___yh    551 ATGAATACATCATAAGCCCTTTGGTTGAATCTCAAAAGCATTTCTGGCCT    600

BSNT_01534___    601 GTAACAGTCTATTGCAATTTTGATTTCCACTTCCACAATGTTTGGAGATT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09050___yh    601 GTAACAGTCTATTGCAATTTTGATTTCCACTTCCACAATGTTTGGAGATT    650

BSNT_01534___    651 GGAACTAAAACCTATCCATCTGTCTGTGCTAGGGTTTCCTATTACTTTAG    700
                     |||||||||||||||||||||||||||||||||||||||||||.||.|||
BSU09050___yh    651 GGAACTAAAACCTATCCATCTGTCTGTGCTAGGGTTTCCTATTGCTATAG    700

BSNT_01534___    701 TCATCACGTTCTTGCTGCTCATCATGGCTTCAAAACTGCTTGATCGTAAA    750
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU09050___yh    701 TCATCACATTCTTGCTGCTCATCATGGCTTCAAAACTGCTTGATCGTAAA    750

BSNT_01534___    751 GTAGAGGTGTAA    762
                     ||||||||||||
BSU09050___yh    751 GTAGAGGTGTAA    762


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