Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_01533 and BSU09040

See Amino acid alignment / Visit BSNT_01533 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:29
# Commandline: needle
#    -asequence dna-align/BSNT_01533___yhcD.1.22522.seq
#    -bsequence dna-align/BSU09040___yhcD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01533___yhcD-BSU09040___yhcD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01533___yhcD-BSU09040___yhcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01533___yhcD
# 2: BSU09040___yhcD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 156
# Identity:     155/156 (99.4%)
# Similarity:   155/156 (99.4%)
# Gaps:           0/156 ( 0.0%)
# Score: 771.0
# 
#
#=======================================

BSNT_01533___      1 ATGAAAAAGGCAAATCCGTTTACTCATGCGGGTTTGCCTTTTTTGCTGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09040___yh      1 ATGAAAAAGGCAAATCCGTTTACTCATGCGGGTTTGCCTTTTTTGCTGTT     50

BSNT_01533___     51 TCCATCAATTATGTTTTTATCAAATAAATCCATGGAATATGTTGTATTCC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU09040___yh     51 TCCATCAATTATGTTTTTATCAAATAAATCCATGGAATATGTTGTATTCC    100

BSNT_01533___    101 ATCTTGATCTAGTGTACTATGTTACTCATACACCGAGGATTTTTTCCGGG    150
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU09040___yh    101 ACCTTGATCTAGTGTACTATGTTACTCATACACCGAGGATTTTTTCCGGG    150

BSNT_01533___    151 AGGTAA    156
                     ||||||
BSU09040___yh    151 AGGTAA    156


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.