Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01516 and BSU08930

See Amino acid alignment / Visit BSNT_01516 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:27
# Commandline: needle
#    -asequence dna-align/BSNT_01516___cspR.1.22522.seq
#    -bsequence dna-align/BSU08930___cspR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01516___cspR-BSU08930___cspR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01516___cspR-BSU08930___cspR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01516___cspR
# 2: BSU08930___cspR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 483
# Identity:     470/483 (97.3%)
# Similarity:   470/483 (97.3%)
# Gaps:           9/483 ( 1.9%)
# Score: 2334.0
# 
#
#=======================================

BSNT_01516___      1 ---------GTGGCATTACATGTCGTTTTATATCAACCAGAAATTCCCGC     41
                              |||||||||||||||||||||||||||||||||||||||||
BSU08930___cs      1 GTGAACATTGTGGCATTACATGTCGTTTTATATCAACCAGAAATTCCCGC     50

BSNT_01516___     42 TAACACAGGGAATATTGCACGTACTTGTGCAGCAACCAATACAACGCTAC     91
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08930___cs     51 TAACACAGGGAATATTGCACGTACTTGTGCAGCAACCAATACAACGCTAC    100

BSNT_01516___     92 ACCTGATTCGTCCGCTCGGCTTTTCAACGGATGATAAAATGCTGAAGCGT    141
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08930___cs    101 ACCTGATTCGTCCGCTCGGCTTTTCAACGGATGATAAAATGCTGAAGCGT    150

BSNT_01516___    142 GCCGGACTCGATTATTGGGAGTTTGTTAATGTTGTGTATCATGATTCGTT    191
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU08930___cs    151 GCCGGACTCGATTATTGGGAGTTTGTTAACGTTGTGTATCATGATTCGTT    200

BSNT_01516___    192 AGAAGAATTGTTTGAGGCATATGAAAAAGGCCAGTTTTTCTTTATTACAA    241
                     ||||||||||||||||||||||.||||||||.||||||||||||||||||
BSU08930___cs    201 AGAAGAATTGTTTGAGGCATATAAAAAAGGCAAGTTTTTCTTTATTACAA    250

BSNT_01516___    242 AATTTGGCCAGCAGCCTCATACATCATTTGATTACACTGATCTTGACGAG    291
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08930___cs    251 AATTTGGCCAGCAGCCTCATACATCATTTGATTACACTGATCTTGACGAG    300

BSNT_01516___    292 GATTATTTCTTCGTGTTCGGAAGAGAAACAAGCGGTTTGCCAAAGGATTT    341
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08930___cs    301 GATTATTTCTTCGTGTTCGGAAGAGAAACAAGCGGTTTGCCAAAGGATTT    350

BSNT_01516___    342 AATTCAAAATAATATGGACCGCTGCCTGCGTCTTCCGATGACAGAGCATG    391
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08930___cs    351 AATTCAAAATAATATGGACCGCTGCCTGCGTCTTCCGATGACAGAGCATG    400

BSNT_01516___    392 TCAGATCGTTAAACCTGTCCAATACTGCCGCGATTCTTGTTTATGAAGCG    441
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU08930___cs    401 TCAGATCGTTAAATCTGTCCAATACTGCCGCGATTCTTGTTTATGAAGCG    450

BSNT_01516___    442 CTGCGCCAGCAAAATTACCGTGATTTAAAATAG    474
                     |||||||||||||||||||||||||||||||||
BSU08930___cs    451 CTGCGCCAGCAAAATTACCGTGATTTAAAATAG    483


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