Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01508 and BSU08880

See Amino acid alignment / Visit BSNT_01508 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:26
# Commandline: needle
#    -asequence dna-align/BSNT_01508___rpsN.1.22522.seq
#    -bsequence dna-align/BSU08880___yhzA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01508___rpsN-BSU08880___yhzA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01508___rpsN-BSU08880___yhzA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01508___rpsN
# 2: BSU08880___yhzA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     265/270 (98.1%)
# Similarity:   265/270 (98.1%)
# Gaps:           0/270 ( 0.0%)
# Score: 1305.0
# 
#
#=======================================

BSNT_01508___      1 TTGGCTAAAAAATCAAAAGTGGCAAAAGAGTTAAAACGCCAACAGCTTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08880___yh      1 TTGGCTAAAAAATCAAAAGTGGCAAAAGAGTTAAAACGCCAACAGCTTGT     50

BSNT_01508___     51 TGAGCAATACGCTGGTATTAGACGCGAGTTGAAGGAAAAAGGAGATTACG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08880___yh     51 TGAGCAATACGCTGGTATTAGACGCGAGTTGAAGGAAAAAGGAGATTACG    100

BSNT_01508___    101 AGGCACTCAGCAAGCTGCCAAGAGATTCAGCACCGGGAAGGCTCCACAAC    150
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU08880___yh    101 AGGCACTCAGCAAGCTGCCAAGAGATTCAGCACCGGGAAGGCTTCACAAC    150

BSNT_01508___    151 CGCTGTATGGTAACGGGACGCCCGAGAGGATATATGAGGAAGTTTAAAAT    200
                     |||||.|||||||||||.||||||||||.|||||||||||||||||||||
BSU08880___yh    151 CGCTGCATGGTAACGGGGCGCCCGAGAGCATATATGAGGAAGTTTAAAAT    200

BSNT_01508___    201 GTCCAGAATCGCTTTCAGGGAGCTGGCCCATAAAGGCCAGGTTCCCGGTG    250
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU08880___yh    201 GTCCAGAATCGCTTTCAGGGAGCTGGCCCATAAAGGCCAGATTCCCGGTG    250

BSNT_01508___    251 TGAAAAAAGCAAGCTGGTAA    270
                     ||||||||||||||||||||
BSU08880___yh    251 TGAAAAAAGCAAGCTGGTAA    270


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