Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01497 and BSU08810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:25
# Commandline: needle
# -asequence dna-align/BSNT_01497.1.22522.seq
# -bsequence dna-align/BSU08810___senS.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01497-BSU08810___senS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01497-BSU08810___senS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01497
# 2: BSU08810___senS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity: 179/219 (81.7%)
# Similarity: 179/219 (81.7%)
# Gaps: 36/219 (16.4%)
# Score: 879.0
#
#
#=======================================
BSNT_01497 1 ---------------------ATGGGAGTCAAAAAAGAAAAGGGGAGAAA 29
|||||||||||||||||||||||||||||
BSU08810___se 1 ATGAAAAAGGGGGGATTATTGATGGGAGTCAAAAAAGAAAAGGGGAGAAA 50
BSNT_01497 30 ACGATTTAGGAAGCGAAAAACCTTCGGGAATCAGATTTTGCCGCTTGAGC 79
||||||.||||||||||||||||.||||||||||||||||||||||||||
BSU08810___se 51 ACGATTCAGGAAGCGAAAAACCTACGGGAATCAGATTTTGCCGCTTGAGC 100
BSNT_01497 80 TGCTGATTGAAAAAAACAAACGAGAGATTATAAACAGCGCGGAGCTCATG 129
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU08810___se 101 TGCTGATTGAAAAAAACAAACGAGAGATTATAAACAGCGCGGAACTCATG 150
BSNT_01497 130 GAAGAAATTTATATGAAGATTGATGAGAAGCATACGCAATGTGTAACTAA 179
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08810___se 151 GAAGAAATTTATATGAAGATTGATGAGAAGCATACGCAATGTGTAACTAA 200
BSNT_01497 180 ATAG--------------- 183
|||.
BSU08810___se 201 ATATAAAAAAACCCGCTGA 219
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