Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01494 and BSU08780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:25
# Commandline: needle
# -asequence dna-align/BSNT_01494___ygaJ.1.22522.seq
# -bsequence dna-align/BSU08780___ygaJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01494___ygaJ-BSU08780___ygaJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01494___ygaJ-BSU08780___ygaJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01494___ygaJ
# 2: BSU08780___ygaJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 696
# Identity: 676/696 (97.1%)
# Similarity: 676/696 (97.1%)
# Gaps: 3/696 ( 0.4%)
# Score: 3312.0
#
#
#=======================================
BSNT_01494___ 1 ATGATGAAGCAGATTATTGCGATGGGGGGCGGGGGTTTTTCGATGGAGCC 50
|||||||||||||||||||||||||||||||||||||||||||||||
BSU08780___yg 1 ---ATGAAGCAGATTATTGCGATGGGGGGCGGGGGTTTTTCGATGGAGCC 47
BSNT_01494___ 51 GGATAATTTGTCCCTCGATCAATATATCCTCAATCAATCAAAACGAGAGC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08780___yg 48 GGATAATTTGTCCCTCGATCAATATATCCTCAATCAATCAAAACGAGAGC 97
BSNT_01494___ 101 AGCCTCGTATTTGTTTTTTGCCGACGGCGAGCGGAGATTCCCAAAACTAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08780___yg 98 AGCCTCGTATTTGTTTTTTGCCGACGGCGAGCGGAGATTCCCAAAACTAT 147
BSNT_01494___ 151 ATTCAGCGGTTTTATCATGCATTTCAAACACTGGATTGTGTGCCGTCTCA 200
||||||||||||||||||||||||||||||.|||||||.|||||||||||
BSU08780___yg 148 ATTCAGCGGTTTTATCATGCATTTCAAACATTGGATTGCGTGCCGTCTCA 197
BSNT_01494___ 201 CTTATCTTTGTTTAAGCCGCCATCAACAGATTTAACTTCTTTTGTTATGG 250
.|||||||||||||||||.||||||.||||||||..||||||||||||||
BSU08780___yg 198 TTTATCTTTGTTTAAGCCACCATCATCAGATTTAGTTTCTTTTGTTATGG 247
BSNT_01494___ 251 AAATGGACGTGATTTATGTTGGCGGGGGAAATACGCGGAATTTACTTGTG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08780___yg 248 AAATGGACGTGATTTATGTTGGCGGGGGAAATACGCGGAATTTACTTGTG 297
BSNT_01494___ 301 TTATGGAAAGAGTGGGGGCTTGACCAGATTCTTAGGGAAGCATGGAAGAA 350
||||||||||||||||||||.|||||.|||||.|||||||||||||||||
BSU08780___yg 298 TTATGGAAAGAGTGGGGGCTGGACCATATTCTCAGGGAAGCATGGAAGAA 347
BSNT_01494___ 351 CGGTGTGGTTTTAGCTGGATTAAGTGCCGGTGCGATCTGCTGGTTTGAAG 400
||||||||||.||||||||.||||||||||||||||||||||||||||||
BSU08780___yg 348 CGGTGTGGTTGTAGCTGGAATAAGTGCCGGTGCGATCTGCTGGTTTGAAG 397
BSNT_01494___ 401 AAGGGGTGACGGATTCAGCCGGACCGCTGACAAGTTTGAAAAGTTTAGGT 450
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU08780___yg 398 AAGGGGTGACAGATTCAGCCGGACCGCTGACAAGTTTGAAAAGTTTAGGT 447
BSNT_01494___ 451 TTTTTGCAAGGGAGCTTTTGTCCCCATTATGACGGGGAAAAGGATCGGAG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08780___yg 448 TTTTTGCAAGGGAGCTTTTGTCCCCATTATGACGGGGAAAAGGATCGGAG 497
BSNT_01494___ 501 ACCGGCATACCACCAGCTGATATCTAACAAGTTCTTATGCAGTGGCTATG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08780___yg 498 ACCGGCATACCACCAGCTGATATCTAACAAGTTCTTATGCAGTGGCTATG 547
BSNT_01494___ 551 CAGCGGATGATGGGGCTGCTCTCCATTTCATAAATGATCAGCTGTTTCAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08780___yg 548 CAGCGGATGATGGGGCTGCTCTCCATTTCATAAATGATCAGCTGTTTCAG 597
BSNT_01494___ 601 ACTGTGAGTTCAAGGTCGGAAGGAAAGGCATATCGGGTGATGATGGCTGA 650
|||||||||||||||||||..|.|||||||||||||||||||||||||||
BSU08780___yg 598 ACTGTGAGTTCAAGGTCGGGTGCAAAGGCATATCGGGTGATGATGGCTGA 647
BSNT_01494___ 651 ACATGAAATAGCTGAAATTCCGTTGCCGGTCAAATATTTAGGGTGA 696
||||||||||||||||||.|||||||||||||||||||||||||||
BSU08780___yg 648 ACATGAAATAGCTGAAATCCCGTTGCCGGTCAAATATTTAGGGTGA 693
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