Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01494 and BSU08780

See Amino acid alignment / Visit BSNT_01494 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:25
# Commandline: needle
#    -asequence dna-align/BSNT_01494___ygaJ.1.22522.seq
#    -bsequence dna-align/BSU08780___ygaJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01494___ygaJ-BSU08780___ygaJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01494___ygaJ-BSU08780___ygaJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01494___ygaJ
# 2: BSU08780___ygaJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 696
# Identity:     676/696 (97.1%)
# Similarity:   676/696 (97.1%)
# Gaps:           3/696 ( 0.4%)
# Score: 3312.0
# 
#
#=======================================

BSNT_01494___      1 ATGATGAAGCAGATTATTGCGATGGGGGGCGGGGGTTTTTCGATGGAGCC     50
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU08780___yg      1 ---ATGAAGCAGATTATTGCGATGGGGGGCGGGGGTTTTTCGATGGAGCC     47

BSNT_01494___     51 GGATAATTTGTCCCTCGATCAATATATCCTCAATCAATCAAAACGAGAGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08780___yg     48 GGATAATTTGTCCCTCGATCAATATATCCTCAATCAATCAAAACGAGAGC     97

BSNT_01494___    101 AGCCTCGTATTTGTTTTTTGCCGACGGCGAGCGGAGATTCCCAAAACTAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08780___yg     98 AGCCTCGTATTTGTTTTTTGCCGACGGCGAGCGGAGATTCCCAAAACTAT    147

BSNT_01494___    151 ATTCAGCGGTTTTATCATGCATTTCAAACACTGGATTGTGTGCCGTCTCA    200
                     ||||||||||||||||||||||||||||||.|||||||.|||||||||||
BSU08780___yg    148 ATTCAGCGGTTTTATCATGCATTTCAAACATTGGATTGCGTGCCGTCTCA    197

BSNT_01494___    201 CTTATCTTTGTTTAAGCCGCCATCAACAGATTTAACTTCTTTTGTTATGG    250
                     .|||||||||||||||||.||||||.||||||||..||||||||||||||
BSU08780___yg    198 TTTATCTTTGTTTAAGCCACCATCATCAGATTTAGTTTCTTTTGTTATGG    247

BSNT_01494___    251 AAATGGACGTGATTTATGTTGGCGGGGGAAATACGCGGAATTTACTTGTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08780___yg    248 AAATGGACGTGATTTATGTTGGCGGGGGAAATACGCGGAATTTACTTGTG    297

BSNT_01494___    301 TTATGGAAAGAGTGGGGGCTTGACCAGATTCTTAGGGAAGCATGGAAGAA    350
                     ||||||||||||||||||||.|||||.|||||.|||||||||||||||||
BSU08780___yg    298 TTATGGAAAGAGTGGGGGCTGGACCATATTCTCAGGGAAGCATGGAAGAA    347

BSNT_01494___    351 CGGTGTGGTTTTAGCTGGATTAAGTGCCGGTGCGATCTGCTGGTTTGAAG    400
                     ||||||||||.||||||||.||||||||||||||||||||||||||||||
BSU08780___yg    348 CGGTGTGGTTGTAGCTGGAATAAGTGCCGGTGCGATCTGCTGGTTTGAAG    397

BSNT_01494___    401 AAGGGGTGACGGATTCAGCCGGACCGCTGACAAGTTTGAAAAGTTTAGGT    450
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU08780___yg    398 AAGGGGTGACAGATTCAGCCGGACCGCTGACAAGTTTGAAAAGTTTAGGT    447

BSNT_01494___    451 TTTTTGCAAGGGAGCTTTTGTCCCCATTATGACGGGGAAAAGGATCGGAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08780___yg    448 TTTTTGCAAGGGAGCTTTTGTCCCCATTATGACGGGGAAAAGGATCGGAG    497

BSNT_01494___    501 ACCGGCATACCACCAGCTGATATCTAACAAGTTCTTATGCAGTGGCTATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08780___yg    498 ACCGGCATACCACCAGCTGATATCTAACAAGTTCTTATGCAGTGGCTATG    547

BSNT_01494___    551 CAGCGGATGATGGGGCTGCTCTCCATTTCATAAATGATCAGCTGTTTCAG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08780___yg    548 CAGCGGATGATGGGGCTGCTCTCCATTTCATAAATGATCAGCTGTTTCAG    597

BSNT_01494___    601 ACTGTGAGTTCAAGGTCGGAAGGAAAGGCATATCGGGTGATGATGGCTGA    650
                     |||||||||||||||||||..|.|||||||||||||||||||||||||||
BSU08780___yg    598 ACTGTGAGTTCAAGGTCGGGTGCAAAGGCATATCGGGTGATGATGGCTGA    647

BSNT_01494___    651 ACATGAAATAGCTGAAATTCCGTTGCCGGTCAAATATTTAGGGTGA    696
                     ||||||||||||||||||.|||||||||||||||||||||||||||
BSU08780___yg    648 ACATGAAATAGCTGAAATCCCGTTGCCGGTCAAATATTTAGGGTGA    693


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