Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01493 and BSU08779

See Amino acid alignment / Visit BSNT_01493 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:25
# Commandline: needle
#    -asequence dna-align/BSNT_01493___yraD.1.22522.seq
#    -bsequence dna-align/BSU08779___ygzC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01493___yraD-BSU08779___ygzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01493___yraD-BSU08779___ygzC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01493___yraD
# 2: BSU08779___ygzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     265/273 (97.1%)
# Similarity:   265/273 (97.1%)
# Gaps:           0/273 ( 0.0%)
# Score: 1293.0
# 
#
#=======================================

BSNT_01493___      1 TTGTATAGAAGCAAGAAACAAAGCCAAATACTTTCTTATCAGGAGCTGCT     50
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU08779___yg      1 TTGTATAGAAGCAAGAAACAAAGTCAAATACTTTCTTATCAGGAGCTGCT     50

BSNT_01493___     51 AAAAAAACAAAGGGGGTGGTTTCCCATTGAACAAAGTCTTTGTCCCAAAG    100
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU08779___yg     51 AAAAAAACAAAGGAGGTGGTTTCCCATTGAACAAAGTCTTTGTCCCAAAG    100

BSNT_01493___    101 ATATTCTTGATTTGTTAACAACAATAAAAACCAGCATTAACAAATACACT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08779___yg    101 ATATTCTTGATTTGTTAACAACAATAAAAACCAGCATTAACAAATACACT    150

BSNT_01493___    151 GTCGCAATAACAGAAGCCGAAAATCCCCACATCAGAATAGCATTGCATGA    200
                     |||||||.|||||.|.|||||||||||||||||||||.||||||||||||
BSU08779___yg    151 GTCGCAACAACAGCAACCGAAAATCCCCACATCAGAAGAGCATTGCATGA    200

BSNT_01493___    201 TCAATTAGATACAACTGTTTATCTCCATGATGAACTGTCAGATCTTCTGT    250
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU08779___yg    201 TCAATTAGATACAGCTGTTTATCTCCATGATGAACTGTCAGATCTTCTGT    250

BSNT_01493___    251 TAGAAAAGGGATGGCTCGGGTGA    273
                     ||||||||||.||||||||||||
BSU08779___yg    251 TAGAAAAGGGGTGGCTCGGGTGA    273


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