Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_01449 and BSU08750

See Amino acid alignment / Visit BSNT_01449 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:24
# Commandline: needle
#    -asequence dna-align/BSNT_01449___ygxA.1.22522.seq
#    -bsequence dna-align/BSU08750___ygxA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01449___ygxA-BSU08750___ygxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01449___ygxA-BSU08750___ygxA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01449___ygxA
# 2: BSU08750___ygxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 885
# Identity:     880/885 (99.4%)
# Similarity:   880/885 (99.4%)
# Gaps:           0/885 ( 0.0%)
# Score: 4380.0
# 
#
#=======================================

BSNT_01449___      1 ATGGAAAATCTTCTCCGTCCAATTTACCAAGAAAGAGCAAGTCACCCCAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08750___yg      1 ATGGAAAATCTTCTCCGTCCAATTTACCAAGAAAGAGCAAGTCACCCCAA     50

BSNT_01449___     51 TACATTGGCTGTCATTATGATTGAGAGAAGAAACAAAACATCTTCCTTAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08750___yg     51 TACATTGGCTGTCATTATGATTGAGAGAAGAAACAAAACATCTTCCTTAA    100

BSNT_01449___    101 CAGATAACTTTGATGCAGCTTTGCTGGTGATTGTAAAGGATGCTGATGAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08750___yg    101 CAGATAACTTTGATGCAGCTTTGCTGGTGATTGTAAAGGATGCTGATGAG    150

BSNT_01449___    151 CCAGTTTTTATAAAGCATTATGAATTTGATCATCAAACAGCTTCTTTGCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08750___yg    151 CCAGTTTTTATAAAGCATTATGAATTTGATCATCAAACAGCTTCTTTGCA    200

BSNT_01449___    201 TGTGGTAACAGATTCTCAGATTCAAGAATGGATTTTGCTTGGAACAAATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08750___yg    201 TGTGGTAACAGATTCTCAGATTCAAGAATGGATTTTGCTTGGAACAAATA    250

BSNT_01449___    251 GAAGAATCATAGATTGGATTGTAAATGGCAGAGTCTTGTTTGACCGTAAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08750___yg    251 GAAGAATCATAGATTGGATTGTAAATGGCAGAGTCTTGTTTGACCGTAAT    300

BSNT_01449___    301 GAATACGTAGTTGAACTGATTGACAGGCTGAATACATTTCCGTTTGCCGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08750___yg    301 GAATACGTAGTTGAACTGATTGACAGGCTGAATACATTTCCGTTTGCCGA    350

BSNT_01449___    351 ACGTAAACTGAAGATCGGACTCGAATACGGCAAATTAATCAGAAGGTATG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08750___yg    351 ACGTAAACTGAAGATCGGACTCGAATACGGCAAATTAATCAGAAGGTATG    400

BSNT_01449___    401 TTGAAGGGAAAGCTTTTTTTGAAGCCAATCAATTTTTAGATGCCTACAAC    450
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU08750___yg    401 TTGAAGGGAAAGCTTTTTTTGAAGCCAATCAATTTTTAGATGCCTACAAT    450

BSNT_01449___    451 GCCGTTGTTCATGCGCTGCATCATTTAGCACGTATTGAAGTAATCGACAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08750___yg    451 GCCGTTGTTCATGCGCTGCATCATTTAGCACGTATTGAAGTAATCGACAG    500

BSNT_01449___    501 AGGATTCCATCCCGAAACCACGGTGTGGAGCCAAGTGCGCCAGATGGAGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08750___yg    501 AGGATTCCATCCCGAAACCACGGTGTGGAGCCAAGTGCGCCAGATGGAGC    550

BSNT_01449___    551 CGCAAGTGTACAAGTTATATTCCGAGCTGATTGAAAGTCACGAGAGCCTG    600
                     |.|||||||||||.||||||||||||||||||||||||||.|||||||||
BSU08750___yg    551 CCCAAGTGTACAAATTATATTCCGAGCTGATTGAAAGTCATGAGAGCCTG    600

BSNT_01449___    601 GAAAAAAGACTTGAATTATTATTCTTAGCAAATGATTTTCTCATCCATTC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08750___yg    601 GAAAAAAGACTTGAATTATTATTCTTAGCAAATGATTTTCTCATCCATTC    650

BSNT_01449___    651 CAAAGCCGAGATCGGTTCGGCGCATCTTTTCGAAGTAATGAAAGAAAAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08750___yg    651 CAAAGCCGAGATCGGTTCGGCGCATCTTTTCGAAGTAATGAAAGAAAAAG    700

BSNT_01449___    701 ACATTTGGCAATTCGGTGAGCTTCTTCAACATCATGACCTAAAGCACTTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08750___yg    701 ACATTTGGCAATTCGGTGAGCTTCTTCAACATCATGACCTAAAGCACTTT    750

BSNT_01449___    751 ACCCAAGATCTTGGCGTTATGCTTGATTACTTGACAGAAAAGGGACTTAT    800
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU08750___yg    751 ACCCAAGATCTTGGCGTTATGCTTGATTACTTGACGGAAAAGGGACTTAT    800

BSNT_01449___    801 CAACGTCTGCCAGATAGAAACGAAAGGACAGGCTGTCTATCACCGAGGAT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08750___yg    801 CAACGTCTGCCAGATAGAAACGAAAGGACAGGCTGTCTATCACCGAGGAT    850

BSNT_01449___    851 ATTCTTTTAAAAAAGGTGTTGACTCTGATTCTTGA    885
                     |||||||||||||||||||||||||||||||||||
BSU08750___yg    851 ATTCTTTTAAAAAAGGTGTTGACTCTGATTCTTGA    885


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.