Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01445 and BSU08720

See Amino acid alignment / Visit BSNT_01445 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:24
# Commandline: needle
#    -asequence dna-align/BSNT_01445___ygaF.1.22522.seq
#    -bsequence dna-align/BSU08720___ygaF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01445___ygaF-BSU08720___ygaF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01445___ygaF-BSU08720___ygaF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01445___ygaF
# 2: BSU08720___ygaF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity:     467/474 (98.5%)
# Similarity:   467/474 (98.5%)
# Gaps:           0/474 ( 0.0%)
# Score: 2307.0
# 
#
#=======================================

BSNT_01445___      1 ATGACTATAGAAATCGGACAAAAAGCGCCTGATCTTGAGTTGAAAGGCGA     50
                     |||||||||||||||||||||||||||||||||||||||||.|||||.||
BSU08720___yg      1 ATGACTATAGAAATCGGACAAAAAGCGCCTGATCTTGAGTTAAAAGGTGA     50

BSNT_01445___     51 TCATGGGGAAACAGTAAAATTATCGGATTATAAAGGAAAGTACATCGTGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08720___yg     51 TCATGGGGAAACAGTAAAATTATCGGATTATAAAGGAAAGTACATCGTGC    100

BSNT_01445___    101 TTTATTTTTATCCAAAGGACATGACACCGGGATGTACAACTGAAGCATGC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08720___yg    101 TTTATTTTTATCCAAAGGACATGACACCGGGATGTACAACTGAAGCATGC    150

BSNT_01445___    151 GATTTTCGGGACAGTCACGAAAGCTTCGCTGAACTGGATGCCGTCATTAT    200
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU08720___yg    151 GATTTTCGGGACAGTCACGAAAGCTTCGCCGAACTGGATGCCGTCATTAT    200

BSNT_01445___    201 TGGCGTCAGCCCGGACAGCCAGGAAAAACACGGAAAATTTAAAGAGAAGC    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU08720___yg    201 CGGCGTCAGCCCGGACAGCCAGGAAAAACACGGAAAATTTAAAGAGAAGC    250

BSNT_01445___    251 ATAACCTTCCATTTCTGCTTCTTGTAGATGACGAGCATAAGCTGGCGGAA    300
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU08720___yg    251 ATAACCTTCCATTTCTGCTTCTTGTTGATGACGAGCATAAGCTGGCGGAA    300

BSNT_01445___    301 GCATTTGATGTGTGGAAGCTGAAGAAAAACTTTGGAAAAGAGTATATGGG    350
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU08720___yg    301 GCATTTGATGTGTGGAAGCTGAAGAAAAACTTCGGAAAAGAGTATATGGG    350

BSNT_01445___    351 AATCGAGCGTTCCACTTTTTTAATTGATAAAGAAGGCCGGCTCATTAAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08720___yg    351 AATCGAGCGTTCCACTTTTTTAATTGATAAAGAAGGCCGGCTCATTAAAG    400

BSNT_01445___    401 AATGGAGAAAAGTAAAAGTAAAGGACCATGTAGCCGAAGCGCTTCAAACC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08720___yg    401 AATGGAGAAAAGTAAAAGTAAAGGACCATGTAGCCGAAGCGCTTCAAACC    450

BSNT_01445___    451 CTCAAAGATATGTCGGAAAAGTAA    474
                     ||||||||||||||.|||||||||
BSU08720___yg    451 CTCAAAGATATGTCTGAAAAGTAA    474


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