Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01437 and BSU08660

See Amino acid alignment / Visit BSNT_01437 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:23
# Commandline: needle
#    -asequence dna-align/BSNT_01437___sspE.1.22522.seq
#    -bsequence dna-align/BSU08660___sspE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01437___sspE-BSU08660___sspE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01437___sspE-BSU08660___sspE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01437___sspE
# 2: BSU08660___sspE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     255/255 (100.0%)
# Similarity:   255/255 (100.0%)
# Gaps:           0/255 ( 0.0%)
# Score: 1275.0
# 
#
#=======================================

BSNT_01437___      1 ATGGCTAACTCAAATAACTTCAGCAAAACAAACGCTCAACAAGTTAGAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08660___ss      1 ATGGCTAACTCAAATAACTTCAGCAAAACAAACGCTCAACAAGTTAGAAA     50

BSNT_01437___     51 ACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTTGGCACTGAATTTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08660___ss     51 ACAAAACCAACAATCAGCTGCTGGTCAAGGTCAATTTGGCACTGAATTTG    100

BSNT_01437___    101 CTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08660___ss    101 CTAGCGAAACAAACGCTCAGCAAGTCAGAAAACAAAACCAGCAATCAGCT    150

BSNT_01437___    151 GGACAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGCACA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08660___ss    151 GGACAACAAGGTCAATTCGGCACTGAATTCGCTAGTGAAACTGACGCACA    200

BSNT_01437___    201 GCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08660___ss    201 GCAGGTAAGACAGCAAAACCAATCTGCTGAACAAAACAAACAACAAAACA    250

BSNT_01437___    251 GCTAA    255
                     |||||
BSU08660___ss    251 GCTAA    255


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