Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01403 and BSU08440

See Amino acid alignment / Visit BSNT_01403 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:19
# Commandline: needle
#    -asequence dna-align/BSNT_01403___yfiY.1.22522.seq
#    -bsequence dna-align/BSU08440___yfiY.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01403___yfiY-BSU08440___yfiY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01403___yfiY-BSU08440___yfiY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01403___yfiY
# 2: BSU08440___yfiY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 978
# Identity:     963/978 (98.5%)
# Similarity:   963/978 (98.5%)
# Gaps:           0/978 ( 0.0%)
# Score: 4755.0
# 
#
#=======================================

BSNT_01403___      1 ATGAAAAAGCATATCAGCATGCTATTCGTATTTTTAATGGCCTTTATGGT     50
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU08440___yf      1 ATGAAAAAGCATATCAGCATGCTATTCGTATTTTTAATGGCCGTTATGGT     50

BSNT_01403___     51 ACTTTCTGCCTGTAATAGTTCAGAAAGTTCAAGCAACAGCGAGGGGTCAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU08440___yf     51 ACTTTCTGCCTGTAATAGTTCAGAAAGTTCAAGCAACAGCGAGGTGTCAA    100

BSNT_01403___    101 GCAGCAAAACAAGAACGGTCAAACATGCAATGGGGACATCAGACAACATT    150
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU08440___yf    101 GCAGCAAAACAAGAACGGTCAAACATGCAATGGGGACATCAGACAACATC    150

BSNT_01403___    151 CCCGCCAATCCAAAACGGATTGTTGTTTTAACAAATGAAGGAACAGAGGC    200
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU08440___yf    151 CCCGCCAATCCAAAACGGATTGTTGTTTTAACTAATGAAGGAACAGAGGC    200

BSNT_01403___    201 GCTCTTAGCGCTTGGCATTAAGCCGGTCGGAGCCGTAAAGTCATGGAAGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08440___yf    201 GCTCTTAGCGCTTGGCATTAAGCCGGTCGGAGCCGTAAAGTCATGGAAGG    250

BSNT_01403___    251 GCGACCCGTGGTATGACTATCTGAAAGATGACATGAAAGGTGTTAAAAAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08440___yf    251 GCGACCCGTGGTATGACTATCTGAAAGATGACATGAAAGGTGTTAAAAAC    300

BSNT_01403___    301 GTCGGTCTTGAAACGGAACCGAATGTGGAAGCCATCGCAGAATTAAAGCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08440___yf    301 GTCGGTCTTGAAACGGAACCGAATGTGGAAGCCATCGCAGAATTAAAGCC    350

BSNT_01403___    351 TGATTTGATTATTGGAAACAAAGTGCGCCAGGAAAAAATTTATGATCAGT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08440___yf    351 TGATTTGATTATTGGAAACAAAGTGCGCCAGGAAAAAATTTATGATCAGT    400

BSNT_01403___    401 TAAATGCAATTGCGCCGACTGTTTTCGCTGAATCTTTGGCCGGGAACTGG    450
                     |||||||.|||||||||||||||||.||||||||||||||||||||||||
BSU08440___yf    401 TAAATGCGATTGCGCCGACTGTTTTTGCTGAATCTTTGGCCGGGAACTGG    450

BSNT_01403___    451 AAGGATAACCTGACTCTATACGCCAACGCGGTGAATAAGGCGGACAAAGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08440___yf    451 AAGGATAACCTGACTCTATACGCCAACGCGGTGAATAAGGCGGACAAAGG    500

BSNT_01403___    501 CAAGGAAGTCATTGCCGATTTTGATAAACGCGTTTCTGATTTAAAAAACA    550
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU08440___yf    501 CAAGGAAGTCATTGCCGATTTTGATAAACGTGTTTCTGATTTAAAAAACA    550

BSNT_01403___    551 AGCTGGGCGACCAGACAAACAAAACCGTTTCTGTCGTACGCTTTTTATCC    600
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU08440___yf    551 AGCTGGGCGACCAGACAAACAAAACCGTTTCAGTCGTACGCTTTTTATCC    600

BSNT_01403___    601 GGTGAGTCAAGAATCTATTATACCGATTCATTCTCAGGGATTATTTTAGA    650
                     |||||.||||||||||||||||||||||||||..|.||||||||||||||
BSU08440___yf    601 GGTGAATCAAGAATCTATTATACCGATTCATTTCCTGGGATTATTTTAGA    650

BSNT_01403___    651 CCAGCTTGGCTTCAAACGCCCTGAAAAACAAGTGGAGCTGTTTAAGAAAC    700
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU08440___yf    651 CCAGCTTGGCTTCAAACGCCCTGAAAAACAAGTGGAACTGTTTAAGAAAC    700

BSNT_01403___    701 AAAAGGACCAATTTACGTTCTCAACCGACAGTAAAGAATCTATTCCTGAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08440___yf    701 AAAAGGACCAATTTACGTTCTCAACCGACAGTAAAGAATCTATTCCTGAT    750

BSNT_01403___    751 ATGGATGCTGATGTGCTGTTTTATTTCACTTATAAAGCCGATAATGCAAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08440___yf    751 ATGGATGCTGATGTGCTGTTTTATTTCACTTATAAAGCCGATAATGCAAA    800

BSNT_01403___    801 GGAAAATGAAAAATGGGCCAATCAGTGGACAAGCAGTTCACTATGGAAAA    850
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU08440___yf    801 AGAAAATGAAAAATGGGCCAATCAGTGGACAAGCAGTTCACTATGGAAAA    850

BSNT_01403___    851 ACCTAAAGGCCGTGAAGTCAGGTAATGCACATGAAGTCGATGACGTCGTA    900
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU08440___yf    851 ACCTGAAGGCCGTGAAGTCAGGTAATGCACATGAAGTCGATGACGTCGTA    900

BSNT_01403___    901 TGGACAACCGCAGGCGGAATTAAAGCCGCAAACTACCTGCTTGATGATAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08440___yf    901 TGGACAACCGCAGGCGGAATTAAAGCCGCAAACTACCTGCTTGATGATAT    950

BSNT_01403___    951 TGAAACCTACTTCTTAAAAACGAAATAA    978
                     ||||||||||||||||||||||||||||
BSU08440___yf    951 TGAAACCTACTTCTTAAAAACGAAATAA    978


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01403 and BSU08440

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
