Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01401 and BSU08410

See Amino acid alignment / Visit BSNT_01401 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:18
# Commandline: needle
#    -asequence dna-align/BSNT_01401___yfiV.1.22522.seq
#    -bsequence dna-align/BSU08410___yfiV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01401___yfiV-BSU08410___yfiV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01401___yfiV-BSU08410___yfiV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01401___yfiV
# 2: BSU08410___yfiV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 483
# Identity:     471/483 (97.5%)
# Similarity:   471/483 (97.5%)
# Gaps:           0/483 ( 0.0%)
# Score: 2307.0
# 
#
#=======================================

BSNT_01401___      1 ATGGAATATAATTTACACGATACAACAGTATTAAACGAAAACATTCTTTC     50
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU08410___yf      1 ATGGAATATAATTTACACGATACAACAGTCTTAAACGAAAACATTCTTTC     50

BSNT_01401___     51 ATCGGAGGAACGGGAAATATGGGTGCTCTATATGAAAGTCTTAACGTCCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08410___yf     51 ATCGGAGGAACGGGAAATATGGGTGCTCTATATGAAAGTCTTAACGTCCG    100

BSNT_01401___    101 CCGGCCTCGGTGATGTGTCCGAGTGGATGAAGCTGGATATGAGCATGCCG    150
                     ||||.||||||||||||||||||||||||||.||||||||||||||||||
BSU08410___yf    101 CCGGGCTCGGTGATGTGTCCGAGTGGATGAAACTGGATATGAGCATGCCG    150

BSNT_01401___    151 CAAATGAAAGTGCTGATGCTATTAAACAACCATGGAACATTGAAAGTGAG    200
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU08410___yf    151 CAAATGAAGGTGCTGATGCTATTAAACAACCATGGAACATTGAAAGTGAG    200

BSNT_01401___    201 CGACATTGCTGAAAAAATGGGGGCTTCCCTGTCCAATACAACTGGGCTGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08410___yf    201 CGACATTGCTGAAAAAATGGGGGCTTCCCTGTCCAATACAACTGGGCTGC    250

BSNT_01401___    251 TTGACCGCCTTGAGAAATCAGGGTTTGTCAAACGCTCACATTCTGAAGAG    300
                     |||||||.|||||.||||||||.|||||||||||||||||||||||||||
BSU08410___yf    251 TTGACCGGCTTGAAAAATCAGGATTTGTCAAACGCTCACATTCTGAAGAG    300

BSNT_01401___    301 GACCGCCGCTCTGTAGTTGTTCAGTTGACAGAAAATGCGAAAAAGATTTT    350
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU08410___yf    301 GACCGCCGCTCTGTAGTTGTTCAGTTGACAGAGAATGCGAAAAAGATTTT    350

BSNT_01401___    351 CCGGGGTTTGTATGAAAAAGGCCACCTGAAATTGAAGCGTTCATTAGAGC    400
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU08410___yf    351 CCGGGGTTTGTATGAAAAGGGCCACCTGAAATTGAAGCGTTCATTAGAGC    400

BSNT_01401___    401 TGCTGTCCCCTGAAGAAAAGCAGGCTGTTTCCGAAGGGCTGTCTATCCTT    450
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU08410___yf    401 TGCTGTCCCCTGAAGAAAAGCAGGCTGTTTACGAAGGGCTGTCTATCCTT    450

BSNT_01401___    451 TCAAGAGCATTAGAAAAAGCGAAAAAAGAATAA    483
                     ||||||||||||||.||.|||||||||||||||
BSU08410___yf    451 TCAAGAGCATTAGAGAATGCGAAAAAAGAATAA    483


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