Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01398 and BSU08400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:18
# Commandline: needle
# -asequence dna-align/BSNT_01398.1.22522.seq
# -bsequence dna-align/BSU08400___yfiU.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01398-BSU08400___yfiU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01398-BSU08400___yfiU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01398
# 2: BSU08400___yfiU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1557
# Identity: 919/1557 (59.0%)
# Similarity: 919/1557 (59.0%)
# Gaps: 615/1557 (39.5%)
# Score: 4503.0
#
#
#=======================================
BSNT_01398 1 ATGTCTGAAGCATTAACAGAGCAGAAAGGCCAAAAGTGGGCGATCAGCCT 50
|||||||||||||||||||||||||||.|||||||||||||.||||||||
BSU08400___yf 1 ATGTCTGAAGCATTAACAGAGCAGAAAAGCCAAAAGTGGGCAATCAGCCT 50
BSNT_01398 51 GTTTACGATTGGTGTATTTATGGCTGCGCTAGATAACGGAATTATTTCAG 100
||||||||||||.||.|||||||||||..|||||||||||||||||||.|
BSU08400___yf 51 GTTTACGATTGGCGTGTTTATGGCTGCTTTAGATAACGGAATTATTTCGG 100
BSNT_01398 101 CTGCCTTAACAACGATAAACGAGTCGTTTGCCGTTTCTCCTTCCTGGGGA 150
||||.||||||||||||||||||||||||.|||||||.||||||||||||
BSU08400___yf 101 CTGCTTTAACAACGATAAACGAGTCGTTTTCCGTTTCCCCTTCCTGGGGA 150
BSNT_01398 151 TCATGGGGCATTACCCTTTATACGCTCGGTCTTAGCGTCAGTGTGCCAAT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08400___yf 151 TCATGGGGCATTACCCTTTATACGCTCGGTCTTAGCGTCAGTGTGCCAAT 200
BSNT_01398 201 CGTCGGAAAGCTTTCCGACCGCTACGGCAGAAAAAAACTCTTTCTCATTG 250
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU08400___yf 201 CGTCGGAAAACTTTCCGACCGCTACGGCAGAAAAAAACTCTTTCTCATTG 250
BSNT_01398 251 AGGTTTGCCTGTTCGGACTTGGTTCTTTGCTTGTTGCTTTGAGCCAAAGC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08400___yf 251 AGGTTTGCCTGTTCGGACTTGGTTCTTTGCTTGTTGCTTTGAGCCAAAGC 300
BSNT_01398 301 TTCCCGCTCTTTCTGATATCGCGGCTGATTCAGGCGCTTGGAGGCGGCGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08400___yf 301 TTCCCGCTCTTTCTGATATCGCGGCTGATTCAGGCGCTTGGAGGCGGCGG 350
BSNT_01398 351 GATTTTCATCATCGGCAGCTCTCACATTCTCGCGACCCTTCCAAAGGAAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08400___yf 351 GATTTTCATCATCGGCAGCTCTCACATTCTCGCGACCCTTCCAAAGGAAA 400
BSNT_01398 401 AACAGGGGAAGGCACTTGGGCTGCTTGGCGCAATGAACGGGATGGCCGCT 450
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU08400___yf 401 AACAGGGGAAGGCGCTTGGGCTGCTTGGCGCAATGAACGGGATGGCCGCT 450
BSNT_01398 451 GTGCTCGGGCCAAATATCGGAAGCTTTCTGCTTGATTGGACCGGGTCTTG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08400___yf 451 GTGCTCGGGCCAAATATCGGAAGCTTTCTGCTTGATTGGACCGGGTCTTG 500
BSNT_01398 501 GCATTGGCTATTTTTGATTAATTTGCCGATTGCCGTGCTATTGGTTGTTT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08400___yf 501 GCATTGGCTATTTTTGATTAATTTGCCGATTGCCGTGCTATTGGTTGTTT 550
BSNT_01398 551 TCGGCTCATACTTTATCGCGGAAACAAAAGCACCTGAAGCTAAGCGCCTC 600
|||||.|||..||||||||||||||||||||||||||.||||||||||||
BSU08400___yf 551 TCGGCGCATGTTTTATCGCGGAAACAAAAGCACCTGAGGCTAAGCGCCTC 600
BSNT_01398 601 GATGCGGCCGGAATCTTCCTTCTGTCCCTGTCGATTTTAGCCGTGATGTA 650
|||||||||||||||||||||.|||||||||||||||||||.||||||||
BSU08400___yf 601 GATGCGGCCGGAATCTTCCTTTTGTCCCTGTCGATTTTAGCTGTGATGTA 650
BSNT_01398 651 CGGCATGACGAACCTTGACGGGGTAAATCTCTTACACAGCTTGGGGAATC 700
|||||||||.||.||||||||||.||||||||||||||||||||||||||
BSU08400___yf 651 CGGCATGACCAATCTTGACGGGGCAAATCTCTTACACAGCTTGGGGAATC 700
BSNT_01398 701 CGGAGGTTTATGGATGTATTATTTTTGGCATACTCTGTTTTGCAGCGCTT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08400___yf 701 CGGAGGTTTATGGATGTATTATTTTTGGCATACTCTGTTTTGCAGCGCTT 750
BSNT_01398 751 ATCTCGTATGAAAAGAGAGTTGAAATGCGAGGAGGCGATCCCATTTTGGC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08400___yf 751 ATCTCGTATGAAAAGAGAGTTGAAATGCGAGGAGGCGATCCCATTTTGGC 800
BSNT_01398 801 GTATTCTCTGCTGCGAAACCATATGTTTCAGCGCACGCTTATCATCGGTT 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08400___yf 801 GTATTCTCTGCTGCGAAACCATATGTTTCAGCGCACGCTTATCATCGGTT 850
BSNT_01398 851 TGTTATCCGGGGGGCTCTTGGCGGCAGTCATTTTTATCCCGTCATATGTC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08400___yf 851 TGTTATCCGGGGGGCTCTTGGCGGCAGTCATTTTTATCCCGTCATATGTC 900
BSNT_01398 901 GAGCAGTATTTGGGTGTCCCTGCCGCAAAAGCAGGCTATTGA-------- 942
||.||||||||||||||||||||||||||||||||||||||.
BSU08400___yf 901 GAACAGTATTTGGGTGTCCCTGCCGCAAAAGCAGGCTATTGGATGACACC 950
BSNT_01398 942 -------------------------------------------------- 942
BSU08400___yf 951 GCTTGCGTTGGCTTCCGGAATCGGCGCTTGGCTTGGCGGAGCACTTACCG 1000
BSNT_01398 942 -------------------------------------------------- 942
BSU08400___yf 1001 ACAAAAAAGGTCCTGTAAAAACCGTTATTCTTTCGGGAATCATCTCATGT 1050
BSNT_01398 942 -------------------------------------------------- 942
BSU08400___yf 1051 GCGGGGTTTGCTTTATTTCCGCTCTGGGTCACGGAAAAATGGGAGTTTGT 1100
BSNT_01398 942 -------------------------------------------------- 942
BSU08400___yf 1101 GATCGCAAGTGTGGCAGCTGGGATCGGTTTTGGCTTTCTGTTAGGCGCTC 1150
BSNT_01398 942 -------------------------------------------------- 942
BSU08400___yf 1151 CGCTGAACGTCCTTGTATCAGAAGCGGCAAAAACAAATAAGGGTACAGCT 1200
BSNT_01398 942 -------------------------------------------------- 942
BSU08400___yf 1201 CTTGGCACGCTTTCATTAGTAAGGCAAATTGGACTGACCTTGGCGCCTAC 1250
BSNT_01398 942 -------------------------------------------------- 942
BSU08400___yf 1251 TCTTTATGCAGGTTTTATCACAGCCGGGTTTGACCAAATAGGTGATGAGA 1300
BSNT_01398 942 -------------------------------------------------- 942
BSU08400___yf 1301 TCAACAGCCGCTTATCGGACAGCGGATATTCAGAAAAGGCGATGCAGATG 1350
BSNT_01398 942 -------------------------------------------------- 942
BSU08400___yf 1351 ATTCCGGAGATCGACAGTTCTGAAGTTTCTTCTTTACAAGAACAAATCGA 1400
BSNT_01398 942 -------------------------------------------------- 942
BSU08400___yf 1401 ACGCATTCCCGTTCCTGAAGTCAAAACCGCGATAAGCGACGCCATTCATG 1450
BSNT_01398 942 -------------------------------------------------- 942
BSU08400___yf 1451 CGAGTGTCGCCAGCGGCTATGATCATTTATATGCAGCGGCTGCTGTGGTC 1500
BSNT_01398 942 -------------------------------------------------- 942
BSU08400___yf 1501 TCACTTCTGGTGATTGCTGCTATCAGTATTCCGGCTTTCCGCCGGCAAAA 1550
BSNT_01398 942 ------- 942
BSU08400___yf 1551 GCGTTAA 1557
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