Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01394 and BSU08380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:18
# Commandline: needle
# -asequence dna-align/BSNT_01394___yfiS.1.22522.seq
# -bsequence dna-align/BSU08380___yfiS.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01394___yfiS-BSU08380___yfiS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01394___yfiS-BSU08380___yfiS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01394___yfiS
# 2: BSU08380___yfiS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1254
# Identity: 1177/1254 (93.9%)
# Similarity: 1177/1254 (93.9%)
# Gaps: 0/1254 ( 0.0%)
# Score: 5577.0
#
#
#=======================================
BSNT_01394___ 1 ATGGAAAAACCGTTGTTTCGCAATCAAAAAGGACTGATGACACTGTTAGC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08380___yf 1 ATGGAAAAACCGTTGTTTCGCAATCAAAAAGGACTGATGACACTGTTAGC 50
BSNT_01394___ 51 CTCGCAAACCATTTCTTCACTTGGAGACTGGCTTCACATTTTGGCCGTGC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08380___yf 51 CTCGCAAACCATTTCTTCACTTGGAGACTGGCTTCACATTTTGGCCGTGC 100
BSNT_01394___ 101 TAACATTAGCCGCTTTTCAGCTTCATGCTTCTCCATTAGATATGTCGCTT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08380___yf 101 TAACATTAGCCGCTTTTCAGCTTCATGCTTCTCCATTAGATATGTCGCTT 150
BSNT_01394___ 151 TTAATGATGTCGTTTGCTTTGCCTGTCATTGTACTCGGACCTGTATCGGG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08380___yf 151 TTAATGATGTCGTTTGCTTTGCCTGTCATTGTACTCGGACCTGTATCGGG 200
BSNT_01394___ 201 TCTGCTTGCCGACCGTTTTGACAGAAAAACGATCATGTTTCTGTCTGAAA 250
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU08380___yf 201 TCTGCTTGCCGACCGTTTTGACAGAAAAACGATCATGTTTCTATCTGAAA 250
BSNT_01394___ 251 TCGGACGTGCCCTCACCGTTATCAGCTGCGTTTATGTCAGTGAGCTTTGG 300
||||.|||||||||||.|||||||||||||||||||||||||||||||||
BSU08380___yf 251 TCGGCCGTGCCCTCACTGTTATCAGCTGCGTTTATGTCAGTGAGCTTTGG 300
BSNT_01394___ 301 CAGCTTTACGTATTGCTATGCCTTCAGAGCTGTTTTTCTTCACTTTTTTC 350
|||||||||||||||||||.|.|||||||||||||||||||||||||||.
BSU08380___yf 301 CAGCTTTACGTATTGCTATCCGTTCAGAGCTGTTTTTCTTCACTTTTTTT 350
BSNT_01394___ 351 ACCTGCTAAAAACGGAAAGCTTAAGGAATTGGCTCCGGAAGCACACATTC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08380___yf 351 ACCTGCTAAAAACGGAAAGCTTAAGGAATTGGCTCCGGAAGCACACATTC 400
BSNT_01394___ 401 AGCAGGCTGTTTCCGCCAGCAGCATCATTGATAACAGTGCAAAAATCTTC 450
|||||||.|||||||.|||||||||||||||||||||..|||||||||||
BSU08380___yf 401 AGCAGGCCGTTTCCGTCAGCAGCATCATTGATAACAGCTCAAAAATCTTC 450
BSNT_01394___ 451 GGCCCTGCCCTTGGCGGCATGCTGATCGCTGCTGTCTCTATACATTCTGT 500
|||||||||||||||||||.|||||||||||||.||||.|||||.|||||
BSU08380___yf 451 GGCCCTGCCCTTGGCGGCACGCTGATCGCTGCTTTCTCGATACACTCTGT 500
BSNT_01394___ 501 TTTCTATATTAACGCCGGCGCCTTTCTTCTTTCCGCTGTCATTTTGTTTT 550
|||.|||||.||||||||||||||..||||||||||||||||||||||||
BSU08380___yf 501 TTTTTATATAAACGCCGGCGCCTTCTTTCTTTCCGCTGTCATTTTGTTTT 550
BSNT_01394___ 551 TCCTCCCCAAAGATGCTTTTTTACAAAAAGCCAATACACCTCAAGAAAAA 600
||||.||||.||||||||||||||||||||||||||||||||||||||||
BSU08380___yf 551 TCCTTCCCAGAGATGCTTTTTTACAAAAAGCCAATACACCTCAAGAAAAA 600
BSNT_01394___ 601 ACATCAGCACTTGCTTCTATTAAAGAAGGCCTTCAGTATTTGAAACGGAT 650
|||.||||||||.|||||||.||.|||||||||||||.||||||||||||
BSU08380___yf 601 ACAGCAGCACTTACTTCTATCAAGGAAGGCCTTCAGTTTTTGAAACGGAT 650
BSNT_01394___ 651 GCCACTTCTTTTAATAGGCTTACTCACAGCTTGCGTCGTTCTCTTTGTTT 700
|||.|||||.||||.|||||||||.||||||||.||||||||||||||||
BSU08380___yf 651 GCCGCTTCTATTAACAGGCTTACTAACAGCTTGTGTCGTTCTCTTTGTTT 700
BSNT_01394___ 701 TGCAGATTGGTGATTCCCAGGCTATCATTCTTATCCGTTCTTTTTCAGGC 750
|||||||||||||||||||.||.||.|||||||||||.||.||||||||.
BSU08380___yf 701 TGCAGATTGGTGATTCCCAAGCGATTATTCTTATCCGCTCCTTTTCAGGA 750
BSNT_01394___ 751 GCTCCGCCTGAGCTTGCAGGCTGGTGCATGGCCGTCAGCGGAGCCGGCAT 800
||||||||.|||||.||||||||||||||||||||.|||||||||||.||
BSU08380___yf 751 GCTCCGCCCGAGCTGGCAGGCTGGTGCATGGCCGTAAGCGGAGCCGGGAT 800
BSNT_01394___ 801 GCTCCTTACGGCGGCAATTGCCGGCAGACGGCGAATCACCTCTTATTTTC 850
|||||||||.|||||.|||.|||||||||||||||||||.||||||||.|
BSU08380___yf 801 GCTCCTTACAGCGGCCATTACCGGCAGACGGCGAATCACTTCTTATTTGC 850
BSNT_01394___ 851 TTTATTTCTCAGCTGGGACCTTTCTGCTTGGACTAGCAACTGGAGGCGTG 900
||||||||||||||||.|||.||||.||||||||||||||||||||.|.|
BSU08380___yf 851 TTTATTTCTCAGCTGGAACCCTTCTTCTTGGACTAGCAACTGGAGGTGCG 900
BSNT_01394___ 901 CCATTTCTGAGCGGAATGGGAATTGCCGGCATTGCTCTTTTTATTTTCGC 950
|||||.||.|||||.|||||||||||||||||..||||.|||||.||.||
BSU08380___yf 901 CCATTCCTAAGCGGTATGGGAATTGCCGGCATCACTCTCTTTATATTTGC 950
BSNT_01394___ 951 TTTTTTCATCATGGGAGCGGCTTTTGGTCTGGTCCATATTCCATTTCAAA 1000
|||||||||||||||.||||||||.||.||.|||||||||||||||||.|
BSU08380___yf 951 TTTTTTCATCATGGGGGCGGCTTTCGGCCTCGTCCATATTCCATTTCAGA 1000
BSNT_01394___ 1001 TTCTCGTGCAAACAACAGTGCCGGTTGATTACAGCGGCAGGGTGTTTGGC 1050
||||||||||||||||||||||.||.|||||||||||.||||||||.|||
BSU08380___yf 1001 TTCTCGTGCAAACAACAGTGCCTGTCGATTACAGCGGTAGGGTGTTCGGC 1050
BSNT_01394___ 1051 GCCATTCAGAGCGCGACAACCCTCGCCTCCATCCTCGGCATGGCGGGCGG 1100
||.||||||||.|||||||||||||||||.||||||||||||||||||||
BSU08380___yf 1051 GCTATTCAGAGTGCGACAACCCTCGCCTCTATCCTCGGCATGGCGGGCGG 1100
BSNT_01394___ 1101 AGGCATGCTGGCGGAATGGATCGGTGTTTCACTTGCTTTTCTTGTCTGTG 1150
.|||.||||||||||||||||||||||.||||||||||||||||||||||
BSU08380___yf 1101 GGGCGTGCTGGCGGAATGGATCGGTGTATCACTTGCTTTTCTTGTCTGTG 1150
BSNT_01394___ 1151 GCTGCTTGCTGATCTTGATTGGGTTGATTACACTTGTAGGTAAGAAAGTT 1200
||||||||||||||.||||||||||||||||||||.|||||||||||.||
BSU08380___yf 1151 GCTGCTTGCTGATCATGATTGGGTTGATTACACTTATAGGTAAGAAAATT 1200
BSNT_01394___ 1201 TCAGAAAGCAGGCGATATCTTGTCACCAAAAGTAACAAAGGAGCACAAGG 1250
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU08380___yf 1201 GCAGAAAGCAGGCGATATCTTGTCACCAAAAGTAACAAAGGAGCACAAGG 1250
BSNT_01394___ 1251 ATAA 1254
||||
BSU08380___yf 1251 ATAA 1254
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