Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_01393 and BSU08370

See Amino acid alignment / Visit BSNT_01393 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:18
# Commandline: needle
#    -asequence dna-align/BSNT_01393___yfiR.1.22522.seq
#    -bsequence dna-align/BSU08370___yfiR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01393___yfiR-BSU08370___yfiR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01393___yfiR-BSU08370___yfiR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01393___yfiR
# 2: BSU08370___yfiR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 618
# Identity:     599/618 (96.9%)
# Similarity:   599/618 (96.9%)
# Gaps:           0/618 ( 0.0%)
# Score: 2919.0
# 
#
#=======================================

BSNT_01393___      1 TTGTCACCAAAAGTAACAAAGGAGCACAAGGATAAACGGCAGACAAAGAT     50
                     ||||||||||||||||||||||||||||||||||||||||||.||.||||
BSU08370___yf      1 TTGTCACCAAAAGTAACAAAGGAGCACAAGGATAAACGGCAGGCAGAGAT     50

BSNT_01393___     51 TTTAGAGGCTGCCAAAACGGTTTTTAAACGTAAAGGATTCGAATTAACGA    100
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU08370___yf     51 TTTAGAGGCTGCCAAAACGGTTTTTAAACGAAAAGGATTCGAATTAACGA    100

BSNT_01393___    101 CGATGAAGGACGTTGTAGAAGAGTCAGGTTTCAGCCGGGGCGGTGTCTAT    150
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU08370___yf    101 CGATGAAGGATGTTGTAGAAGAGTCAGGTTTCAGCCGGGGCGGTGTCTAT    150

BSNT_01393___    151 CTTTATTTTTCAAGCACTGAGGAGATGTTTCGCCGCATTATTGAAACAGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08370___yf    151 CTTTATTTTTCAAGCACTGAGGAGATGTTTCGCCGCATTATTGAAACAGG    200

BSNT_01393___    201 GCTGGATGAAGGACTCCGAAAGCTTGATAAATCAGCTGAACACCAAAGTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08370___yf    201 GCTGGATGAAGGACTCCGAAAGCTTGATAAATCAGCTGAACACCAAAGTG    250

BSNT_01393___    251 TTTGGTCCGCCATTTCAATCTATTTGGATGAACTGTCTGAGGGCCTGCGT    300
                     |||||.||.|||||||.|.||||||||||||||||.|||||||||||||.
BSU08370___yf    251 TTTGGGCCTCCATTTCCAGCTATTTGGATGAACTGACTGAGGGCCTGCGA    300

BSNT_01393___    301 GATGTAGCAGATACGCTGGCGCCGGTGCAATTTGAATATTTAGTGACAGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08370___yf    301 GATGTAGCAGATACGCTGGCGCCGGTGCAATTTGAATATTTAGTGACAGC    350

BSNT_01393___    351 TTGGCGGAATGAGGAACGTAGGCAGTATTTGGAGAAAAGGTATGATCTTT    400
                     ||||||.|||||.|||||..||||||||||||||||||||||||||||||
BSU08370___yf    351 TTGGCGCAATGAAGAACGGCGGCAGTATTTGGAGAAAAGGTATGATCTTT    400

BSNT_01393___    401 TTGTGGAAAGATTTTCAAATCTATTGCAAAAAGGGATCGATCAGGGAGAG    450
                     ||||||||||.|||||||..||||||||||||||||||||||||||||||
BSU08370___yf    401 TTGTGGAAAGGTTTTCAAGGCTATTGCAAAAAGGGATCGATCAGGGAGAG    450

BSNT_01393___    451 TTTCAGCCGCTTCAGCCTCTTGCGACTATCGCCAAGTTTTTCCTCAATAT    500
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU08370___yf    451 TTTCAGCCGGTTCAGCCTCTTGCGACTATCGCCAAGTTTTTCCTCAATAT    500

BSNT_01393___    501 GAATGACGGCATCATTCAAAACGCCCTGTATTTCGATGAAGAAAAAGCTG    550
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU08370___yf    501 GAATGACGGCATCATTCAAAACGCCCTGTATTTCGATGAAGAAAAGGCTG    550

BSNT_01393___    551 ATGTATCTGGACTTGCTGAGTCTGCAAAACTATATTTAAAAACAGTTCTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08370___yf    551 ATGTATCTGGACTTGCTGAGTCTGCAAAACTATATTTAAAAACAGTTCTG    600

BSNT_01393___    601 CAAGCGGATGAGAAGTAA    618
                     ||||||||||||||||||
BSU08370___yf    601 CAAGCGGATGAGAAGTAA    618


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.