Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01366 and BSU08210

See Amino acid alignment / Visit BSNT_01366 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:15
# Commandline: needle
#    -asequence dna-align/BSNT_01366___yfiB.1.22522.seq
#    -bsequence dna-align/BSU08210___malQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01366___yfiB-BSU08210___malQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01366___yfiB-BSU08210___malQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01366___yfiB
# 2: BSU08210___malQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1722
# Identity:    1699/1722 (98.7%)
# Similarity:  1699/1722 (98.7%)
# Gaps:           0/1722 ( 0.0%)
# Score: 8403.0
# 
#
#=======================================

BSNT_01366___      1 ATGCAAAAGGCTTTGTCGTTTTTAAAACCATATTCATTGCTGGCGGGAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma      1 ATGCAAAAGGCTTTGTCGTTTTTAAAACCATATTCATTGCTGGCGGGAAT     50

BSNT_01366___     51 TGCGCTGATTCTTATGTTGACGGAGCTTGCAGTTGAACTGATGCAGCCTT    100
                     |||.||||||||||||.|||||||||||||||||||||||||||||||||
BSU08210___ma     51 TGCTCTGATTCTTATGCTGACGGAGCTTGCAGTTGAACTGATGCAGCCTT    100

BSNT_01366___    101 TATTAATTGCAAAAATCATCGACGATGGGATATTGAAGCAAGATCTGCGG    150
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma    101 TATTGATTGCAAAAATCATCGACGATGGGATATTGAAGCAAGATCTGCGG    150

BSNT_01366___    151 CATGTATGGATATGGGGCGCGGTCATGATCGGGCTGACCGTGTTATCCTT    200
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU08210___ma    151 CATGTATGGATATGGGGCACGGTCATGATCGGGCTGACCGTGTTATCCTT    200

BSNT_01366___    201 TGCGGCGGGGATGCTGAATTCCTTTTATGCCGCCCATGTCAGCCAAAGCT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma    201 TGCGGCGGGGATGCTGAATTCCTTTTATGCCGCCCATGTCAGCCAAAGCT    250

BSNT_01366___    251 TTTCCTATGATACGAGAAAAGGGCTTTTTCAAAAAATCCAGTCCTTCTCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma    251 TTTCCTATGATACGAGAAAAGGGCTTTTTCAAAAAATCCAGTCCTTCTCC    300

BSNT_01366___    301 TATTCCACATTTGGACAGTTTTCGTCCTCTTCTTATATTACAAGGCTGAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma    301 TATTCCACATTTGGACAGTTTTCGTCCTCTTCTTATATTACAAGGCTGAC    350

BSNT_01366___    351 AAACGACGTCACACAGGTTCAAAATATGATTTTTATGAGTTTGCGGTTTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma    351 AAACGACGTCACACAGGTTCAAAATATGATTTTTATGAGTTTGCGGTTTA    400

BSNT_01366___    401 TGCTGCGGGCTCCCTTAATGATTGCAGGCGGCATTGTGCTGTCGCTTGCC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma    401 TGCTGCGGGCTCCCTTAATGATTGCAGGCGGCATTGTGCTGTCGCTTGCC    450

BSNT_01366___    451 GTTAATGTGAAACTCGGCTTTTTTCTGCTTGTGACCATTCCGATCCTGAT    500
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU08210___ma    451 GTTAATGTGAAACTCGGGTTTTTTCTGCTTGTGACCATTCCGATCCTGAT    500

BSNT_01366___    501 CTTGTTTTTGCTATGGGTATTAAGGAAAGGCGGGGCACTGTTCCGCTCAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma    501 CTTGTTTTTGCTATGGGTATTAAGGAAAGGCGGGGCACTGTTCCGCTCAG    550

BSNT_01366___    551 TGCAGAAAAGGCTGGATCAAGTGAACACCATCATGCAGGAAAATTTAATC    600
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU08210___ma    551 TGCAGAAAAGGCTGGATCAAGTGAACACCATCATGCAGGAAAATTTAATT    600

BSNT_01366___    601 GCAATCAAGCTGATCAAAGCGCTGCTTCGCGGCAGCCACGAAGTCAAACG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma    601 GCAATCAAGCTGATCAAAGCGCTGCTTCGCGGCAGCCACGAAGTCAAACG    650

BSNT_01366___    651 ATTTATCAAAGCCAACACAAGGCTGATGGAAAAAACGGTTTCGGCCTTTC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma    651 ATTTATCAAAGCCAACACAAGGCTGATGGAAAAAACGGTTTCGGCCTTTC    700

BSNT_01366___    701 AGCTTGTGGAATTCACGATGCCTGTACTGATGCTTTTGATGAATCTCTGT    750
                     ||||||||||||||||||||||||||||||||||..|||||||||||||.
BSU08210___ma    701 AGCTTGTGGAATTCACGATGCCTGTACTGATGCTGCTGATGAATCTCTGC    750

BSNT_01366___    751 ATCCTTTTGATTTTGTGGGCGGGGTCCTACAGTATTACGAGCGGAAGCAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma    751 ATCCTTTTGATTTTGTGGGCGGGGTCCTACAGTATTACGAGCGGAAGCAC    800

BSNT_01366___    801 TCAGGTTGGCGATGTTGTTGCGATAATTAACTACGCAACACGAATTACAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma    801 TCAGGTTGGCGATGTTGTTGCGATAATTAACTACGCAACACGAATTACAG    850

BSNT_01366___    851 GCGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACCAGGGCGAAG    900
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU08210___ma    851 GCGCGCTTTCGATGTTTCCGTTTTTGATTATGATTTTCACCCGGGCGAAG    900

BSNT_01366___    901 GCTTCAGGGGATAGAATCGGTGAGGTGCTTGAAACAGAAGGCGACGAGCG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma    901 GCTTCAGGGGATAGAATCGGTGAGGTGCTTGAAACAGAAGGCGACGAGCG    950

BSNT_01366___    951 GGAGGAAGGCATCATATTTGATCGTTTGTCAGGACAGATTGAGTTTCAGC   1000
                     |||||||||||.|||||.|||||||||||||||||.||||||||||||||
BSU08210___ma    951 GGAGGAAGGCACCATATCTGATCGTTTGTCAGGACGGATTGAGTTTCAGC   1000

BSNT_01366___   1001 ATGTATCCTTTCGCTATCCTGAAATGGACAGAGAAGCGCTCAGGAATGTC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma   1001 ATGTATCCTTTCGCTATCCTGAAATGGACAGAGAAGCGCTCAGGAATGTC   1050

BSNT_01366___   1051 TCATTTTCCGCAAAGCCAAGAGAAACGATCGCGATTCTCGGTGCGACGGG   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma   1051 TCATTTTCCGCAAAGCCAAGAGAAACGATCGCGATTCTCGGTGCGACGGG   1100

BSNT_01366___   1101 CTCGGGCAAGTCCACGCTTTTTCAGCTCATCCCGCGGCTTTATCAGCCGG   1150
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU08210___ma   1101 CTCGGGCAAGTCCACGCTTTTTCAGCTCATTCCGCGGCTTTATCAGCCGG   1150

BSNT_01366___   1151 ATTCAGGCCGCATTTACATAGATGAAAAGCCGGTTCAAGATATTCCGGCT   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma   1151 ATTCAGGCCGCATTTACATAGATGAAAAGCCGGTTCAAGATATTCCGGCT   1200

BSNT_01366___   1201 GAAGGGCTGCGCAGGCAAATTGGATATGTACCGCAGGAAGTCCTCTTGTT   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma   1201 GAAGGGCTGCGCAGGCAAATTGGATATGTACCGCAGGAAGTCCTCTTGTT   1250

BSNT_01366___   1251 TTCCGGCACAATCAAAGAAAACATCGCTTGGGGCAAAGAAAATGCTTCAC   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma   1251 TTCCGGCACAATCAAAGAAAACATCGCTTGGGGCAAAGAAAATGCTTCAC   1300

BSNT_01366___   1301 TAGATGAAATAATGGATGCGGCCAAACATGCGCAAATTCATGAAACGATT   1350
                     ||||||||||||||||||||||.||||.||||||||||||||||||||||
BSU08210___ma   1301 TAGATGAAATAATGGATGCGGCAAAACTTGCGCAAATTCATGAAACGATT   1350

BSNT_01366___   1351 TTGAAGCTCCCAAATGGATATGACACAGTTTTGGGGCAAAGAGGCGTCAA   1400
                     ||.|||||||||||||||||||||||.|||||||||||||||||||||||
BSU08210___ma   1351 TTAAAGCTCCCAAATGGATATGACACTGTTTTGGGGCAAAGAGGCGTCAA   1400

BSNT_01366___   1401 CCTGTCCGGCGGCCAAAAACAGCGAATTTCCATTGCGCGGGCACTGATTC   1450
                     ||||||||||||||||||.|||||.|||||||||||||||||.|||||||
BSU08210___ma   1401 CCTGTCCGGCGGCCAAAAGCAGCGGATTTCCATTGCGCGGGCGCTGATTC   1450

BSNT_01366___   1451 GAAAACCGGCTATCCTTCTATTAGATGACAGCACAAGCGCGCTTGATCTG   1500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma   1451 GAAAACCGGCTATCCTTCTATTAGATGACAGCACAAGCGCGCTTGATCTG   1500

BSNT_01366___   1501 CAAACGGAGGCGAAGCTGCTTGAAGCAATCAGCACATACCATTGCACAAC   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma   1501 CAAACGGAGGCGAAGCTGCTTGAAGCAATCAGCACATACCATTGCACAAC   1550

BSNT_01366___   1551 TTTGATCATTACACAAAAAATAACCACGGCGATGAAAGCTGATCAGATTT   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma   1551 TTTGATCATTACACAAAAAATAACCACGGCGATGAAAGCTGATCAGATTT   1600

BSNT_01366___   1601 TGCTGCTTGAGGACGGCGAACTGATTGAAAAAGGCACTCATAGTGAGCTG   1650
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU08210___ma   1601 TGCTGCTTGAGGACGGCGAACTGATTGAAAAAGGCACTCACAGTGAGCTG   1650

BSNT_01366___   1651 CTTTCTGCATCTCAGTTATACAAGCGCATTTACGAGTCACAATTCGGAAG   1700
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU08210___ma   1651 CTTTCTGAATCTCAGTTATACAAGCGCATTTACGAGTCACAATTCGGAAG   1700

BSNT_01366___   1701 GGAGGGGAGCGAGTCATGCTAA   1722
                     ||||||||||||||||||||||
BSU08210___ma   1701 GGAGGGGAGCGAGTCATGCTAA   1722


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