Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01361 and BSU08190

See Amino acid alignment / Visit BSNT_01361 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:13
# Commandline: needle
#    -asequence dna-align/BSNT_01361___yfiA.1.22522.seq
#    -bsequence dna-align/BSU08190___malR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01361___yfiA-BSU08190___malR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01361___yfiA-BSU08190___malR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01361___yfiA
# 2: BSU08190___malR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 765
# Identity:     757/765 (99.0%)
# Similarity:   757/765 (99.0%)
# Gaps:           0/765 ( 0.0%)
# Score: 3753.0
# 
#
#=======================================

BSNT_01361___      1 ATGCAGCTCGAAGAACTGATCAATCAGCACTACAGCAAATTGAATGACAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08190___ma      1 ATGCAGCTCGAAGAACTGATCAATCAGCACTACAGCAAATTGAATGACAA     50

BSNT_01361___     51 CGATTTTCATATTTTAAAATATATATTGAATCATAAGCACACATGCTATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08190___ma     51 CGATTTTCATATTTTAAAATATATATTGAATCATAAGCACACATGCTATC    100

BSNT_01361___    101 ACCTTGGAATCGACGCGCTTGCCAAAGCTTGCAGTGTATCGCGTTCCTCA    150
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU08190___ma    101 ACCTTGGAATCGACGCGCTGGCCAAAGCTTGCAGTGTATCGCGTTCCTCA    150

BSNT_01361___    151 ATTTTACGGCTTGCCCAAAAGCTCGGTTTCAGCGGTTACAGTGAATTTCG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08190___ma    151 ATTTTACGGCTTGCCCAAAAGCTCGGTTTCAGCGGTTACAGTGAATTTCG    200

BSNT_01361___    201 CGTCTTTTTAAAGTGGGAAGATCAGCCGGAAGAAGGCGAGAGTATGAGTT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08190___ma    201 CGTCTTTTTAAAGTGGGAAGATCAGCCGGAAGAAGGCGAGAGTATGAGTT    250

BSNT_01361___    251 TTCAAAAGCTGCTTGATGATATTGAAGCAAATTTGAAGTTCTTACGGACA    300
                     ||.|||||||||||||||||||||||||||||||||||||.|||||||||
BSU08190___ma    251 TTGAAAAGCTGCTTGATGATATTGAAGCAAATTTGAAGTTTTTACGGACA    300

BSNT_01361___    301 AAGGACATGACGGACATGTGCCAGCTGATTGATGAAGCGGACCGCATTTT    350
                     ||||||||||||||||||||||||||||||||||.|||.|||||||||||
BSU08190___ma    301 AAGGACATGACGGACATGTGCCAGCTGATTGATGCAGCTGACCGCATTTT    350

BSNT_01361___    351 CGTCTACGGTTCTGGAAATGCGCAAAAGATATGCGCCCGCGACCTGCAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08190___ma    351 CGTCTACGGTTCTGGAAATGCGCAAAAGATATGCGCCCGCGACCTGCAAA    400

BSNT_01361___    401 GAATGTTTATTCCGCGCCATCGCTATCTTATTTTGATTGAAGATACAAAT    450
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU08190___ma    401 GAATGTTTATTCCGCGCCATCGCTATCTTATTTTGATTGAAGACACAAAT    450

BSNT_01361___    451 GAATTTAATTTGATGCGCGATGATTTTAAAGTAAACGATCTGTTTATCAT    500
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU08190___ma    451 GAATTTAATTTGATGCGCGATGATTTTAAAGTGAACGATCTGTTTATCAT    500

BSNT_01361___    501 CATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08190___ma    501 CATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGC    550

BSNT_01361___    551 TTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGAATTTAAAAAACAAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08190___ma    551 TTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGAATTTAAAAAACAAT    600

BSNT_01361___    601 GTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08190___ma    601 GTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGT    650

BSNT_01361___    651 GACATTAAGCGATAAAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCG    700
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU08190___ma    651 GACATTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCG    700

BSNT_01361___    701 TTGGCGAAGCATTGTTCCGCGCATATGTTGATTACAAAGAGGCAGAAAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08190___ma    701 TTGGCGAAGCATTGTTCCGCGCATATGTTGATTACAAAGAGGCAGAAAAA    750

BSNT_01361___    751 AATGACAATGAGTAG    765
                     |||||||||||||||
BSU08190___ma    751 AATGACAATGAGTAG    765


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