Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_01360 and BSU08180

See Amino acid alignment / Visit BSNT_01360 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:13
# Commandline: needle
#    -asequence dna-align/BSNT_01360___malA.1.22522.seq
#    -bsequence dna-align/BSU08180___malA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01360___malA-BSU08180___malA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01360___malA-BSU08180___malA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01360___malA
# 2: BSU08180___malA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1350
# Identity:    1310/1350 (97.0%)
# Similarity:  1310/1350 (97.0%)
# Gaps:           0/1350 ( 0.0%)
# Score: 6390.0
# 
#
#=======================================

BSNT_01360___      1 ATGAAGAAAAAATCATTCTCAATCGTAATAGCGGGCGGAGGGAGCACTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08180___ma      1 ATGAAGAAAAAATCATTCTCAATCGTAATAGCGGGCGGAGGGAGCACTTT     50

BSNT_01360___     51 CACTCCAGGGATCGTACTCATGCTCTTGGACCATTTGGAGGAGTTTCCGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08180___ma     51 CACTCCAGGGATCGTACTCATGCTCTTGGACCATTTGGAGGAGTTTCCGA    100

BSNT_01360___    101 TCAGAAAGCTGAAGCTGTATGATAATGATAAGGAGAGACAGGATCGAATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08180___ma    101 TCAGAAAGCTGAAGCTGTATGATAATGATAAGGAGAGACAGGATCGAATT    150

BSNT_01360___    151 GCAGGCGCCTGTGACGTTTTTATCAGAGAAAAAGCGCCGGATATGGAATT    200
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU08180___ma    151 GCAGGCGCCTGTGACGTTTTTATCAGAGAAAAAGCGCCGGATATTGAATT    200

BSNT_01360___    201 TGCAGCGACGACTGACCCGGAAGAAGCTTTTACAGATGTCGATTTTGTTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08180___ma    201 TGCAGCGACGACTGACCCGGAAGAAGCTTTTACAGATGTCGATTTTGTTA    250

BSNT_01360___    251 TGGCGCACATCAGAGTAGGGAAATACGCGATGCGTGCGCTTGATGAGCAA    300
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU08180___ma    251 TGGCGCACATCAGAGTAGGGAAATACGCGATGCGCGCGCTTGATGAGCAA    300

BSNT_01360___    301 ATTCCGTTAAAGTACGGAGTTGTCGGCCAGGAGACGTGCGGGCCGGGCGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08180___ma    301 ATTCCGTTAAAGTACGGAGTTGTCGGCCAGGAGACGTGCGGGCCGGGCGG    350

BSNT_01360___    351 GATCGCATACGGTATGCGTTCGATCGGCGGTGTGCTTGAAATATTAGATT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08180___ma    351 GATCGCATACGGTATGCGTTCGATCGGCGGTGTGCTTGAAATATTAGATT    400

BSNT_01360___    401 ACATGGAAAAATACTCGCCTGATGCGTGGATGCTCAATTATTCCAATCCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08180___ma    401 ACATGGAAAAATACTCGCCTGATGCGTGGATGCTCAATTATTCCAATCCG    450

BSNT_01360___    451 GCGGCAATTGTGGCTGAAGCTACGAGACGCCTTAAACCGAATTCTAAAAT    500
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU08180___ma    451 GCGGCAATTGTGGCTGAAGCTACGAGACGCCTTAGACCGAATTCTAAAAT    500

BSNT_01360___    501 TCTCAATATCTGTGATATGCCGGTTGGGATCGAAGACCGGATGGCGCAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08180___ma    501 TCTCAATATCTGTGATATGCCGGTTGGGATCGAAGACCGGATGGCGCAAA    550

BSNT_01360___    551 TTCTTGGCTTATCCTCAAGAAAAGAAATGAAGGTCCGCTATTACGGATTA    600
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU08180___ma    551 TTCTTGGCTTATCCTCAAGAAAAGAAATGAAGGTCCGCTATTACGGATTG    600

BSNT_01360___    601 AATCACTTCGGCTGGTGGACATCAATTCAGGATCAAGAGGGCAACGATTT    650
                     |||||.|||||||||||||||||.||||||||||||||||||||||||||
BSU08180___ma    601 AATCATTTCGGCTGGTGGACATCGATTCAGGATCAAGAGGGCAACGATTT    650

BSNT_01360___    651 AATGCCGAAGCTGAAGGAGCATGTATCTCAATACGGCTATATTCCGAAAA    700
                     ||||||||||||||||||.||||||||.||||||||.|||||||||||||
BSU08180___ma    651 AATGCCGAAGCTGAAGGAACATGTATCCCAATACGGTTATATTCCGAAAA    700

BSNT_01360___    701 CAGAGGCTGAAGCGGTGGAAGCGAGCTGGAATGACACATTCGCCAAAGCG    750
                     |||||||||||||.|||||.||.||||||||||||||.||||||||||||
BSU08180___ma    701 CAGAGGCTGAAGCTGTGGAGGCAAGCTGGAATGACACGTTCGCCAAAGCG    750

BSNT_01360___    751 CGTGACGTGCAGGCCGCAGATCCTGATACACTGCCGAATACGTATTTGCA    800
                     ||||||||||||||.|||||||||||.|||||||||||||||||||||||
BSU08180___ma    751 CGTGACGTGCAGGCTGCAGATCCTGACACACTGCCGAATACGTATTTGCA    800

BSNT_01360___    801 ATATTATTTGTTCCCGGATGATATGGTGAAAAAATCAAATCCGAATCATA    850
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU08180___ma    801 ATATTATTTGTTCCCAGATGATATGGTGAAAAAATCAAATCCGAATCATA    850

BSNT_01360___    851 CGCGGGCAAATGAAGTGATGGAAGGGCGCGAAGCTTTTATTTTCAGCCAA    900
                     |||||||.||||||||.|||||||||||||||||||||||||||||||||
BSU08180___ma    851 CGCGGGCGAATGAAGTCATGGAAGGGCGCGAAGCTTTTATTTTCAGCCAA    900

BSNT_01360___    901 TGTGACATGATTACACGTGAGCAGTCCACAGAAAACAGCGAAATCAAAAT    950
                     |||||||||||.||||||||.||||||.|.||||||||||||||.|||||
BSU08180___ma    901 TGTGACATGATCACACGTGAACAGTCCTCGGAAAACAGCGAAATTAAAAT    950

BSNT_01360___    951 CGATGACCACGCATCATATATCGTTGATCTTGCCCGGGCGATTGCCTACA   1000
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU08180___ma    951 CGATGACCACGCATCGTATATCGTTGATCTTGCCCGGGCGATTGCCTACA   1000

BSNT_01360___   1001 ACACAGGTGAAAGAATGCTGTTGATCGTTGAAAATAACGGCGCAATTGCG   1050
                     |||||||||||||||||||||||||.||||||||||||||.|||||||||
BSU08180___ma   1001 ACACAGGTGAAAGAATGCTGTTGATTGTTGAAAATAACGGTGCAATTGCG   1050

BSNT_01360___   1051 AACTTTGACCCGACTGCGATGGTCGAGGTGCCATGCATTGTCGGCTCAAA   1100
                     |||||||||||||||||||||||.||||||||||||||.|||||||||||
BSU08180___ma   1051 AACTTTGACCCGACTGCGATGGTTGAGGTGCCATGCATCGTCGGCTCAAA   1100

BSNT_01360___   1101 TGGGCCTGAACCGATTACCGTCGGCACCATTCCGCAATTCCAAAAAGGGC   1150
                     |||.|||||||||||||||||.||||||||||||||||||||.|||||||
BSU08180___ma   1101 TGGACCTGAACCGATTACCGTTGGCACCATTCCGCAATTCCAGAAAGGGC   1150

BSNT_01360___   1151 TTATGGAGCAGCAGGTATCCGTTGAGAAGCTGACTGTTGAAGCGTGGGCG   1200
                     |.|||||||||||||||||||||||||||||||||||||||||||||||.
BSU08180___ma   1151 TCATGGAGCAGCAGGTATCCGTTGAGAAGCTGACTGTTGAAGCGTGGGCA   1200

BSNT_01360___   1201 GAGAAATCGTTCCAAAAGCTGTGGCAGGCGCTAATTTTGTCAAAAACAGT   1250
                     ||||||||||||||||||||||||||||||||.||..|||||||||||||
BSU08180___ma   1201 GAGAAATCGTTCCAAAAGCTGTGGCAGGCGCTGATCCTGTCAAAAACAGT   1250

BSNT_01360___   1251 GCCGAACGCGCGTGTGGCAAGACTCATTCTCGAGGATTTAATGGAGGCCA   1300
                     ||||||||||||||||||||||||||||||.|||||||||.|||||||||
BSU08180___ma   1251 GCCGAACGCGCGTGTGGCAAGACTCATTCTTGAGGATTTAGTGGAGGCCA   1300

BSNT_01360___   1301 ACAAAGACTTCTGGCCTGAGCTTGATCAAAGCCCGACCCGTATATCATAA   1350
                     ||||||||||||||||||||||||||||||||||.|||||.|||||||||
BSU08180___ma   1301 ACAAAGACTTCTGGCCTGAGCTTGATCAAAGCCCAACCCGCATATCATAA   1350


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.