Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_01359 and BSU08170

See Amino acid alignment / Visit BSNT_01359 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:13
# Commandline: needle
#    -asequence dna-align/BSNT_01359___yfjA.1.22522.seq
#    -bsequence dna-align/BSU08170___yfjA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01359___yfjA-BSU08170___yfjA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01359___yfjA-BSU08170___yfjA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01359___yfjA
# 2: BSU08170___yfjA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     315/315 (100.0%)
# Similarity:   315/315 (100.0%)
# Gaps:           0/315 ( 0.0%)
# Score: 1575.0
# 
#
#=======================================

BSNT_01359___      1 TTGGACTCATATAAAGTCATTGAGCTGGCAAACAAGTATAGTGCGGCCGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08170___yf      1 TTGGACTCATATAAAGTCATTGAGCTGGCAAACAAGTATAGTGCGGCCGC     50

BSNT_01359___     51 AGAAGAGGTCAGAAGCTCCAAAATGCTGCTTGAATCCCGGTTATCTGCAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08170___yf     51 AGAAGAGGTCAGAAGCTCCAAAATGCTGCTTGAATCCCGGTTATCTGCAT    100

BSNT_01359___    101 TGGGAGATGCTTGGCAGGGCAAAGCAAGAGATTCGTTTGACCAGGATTTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08170___yf    101 TGGGAGATGCTTGGCAGGGCAAAGCAAGAGATTCGTTTGACCAGGATTTC    150

BSNT_01359___    151 GAGGAAACGAAAGCCGCCTACGATCAATTCGAACAGGAGCTGCTTGAAAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08170___yf    151 GAGGAAACGAAAGCCGCCTACGATCAATTCGAACAGGAGCTGCTTGAAAC    200

BSNT_01359___    201 AAGCCAAGAGCTGAAGGCTGCCGCTGTCAAAATAGAAGAACGAAAAGCTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08170___yf    201 AAGCCAAGAGCTGAAGGCTGCCGCTGTCAAAATAGAAGAACGAAAAGCTG    250

BSNT_01359___    251 AAATTGCCAGAATGGAAGAACTGGAGCGTAAAGCAAGAGAGGAAAGACAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08170___yf    251 AAATTGCCAGAATGGAAGAACTGGAGCGTAAAGCAAGAGAGGAAAGACAT    300

BSNT_01359___    301 AAACTCGGGAGGTGA    315
                     |||||||||||||||
BSU08170___yf    301 AAACTCGGGAGGTGA    315


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.