Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01356 and BSU08140

See Amino acid alignment / Visit BSNT_01356 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:12
# Commandline: needle
#    -asequence dna-align/BSNT_01356___yfjD.1.22522.seq
#    -bsequence dna-align/BSU08140___yfjD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01356___yfjD-BSU08140___yfjD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01356___yfjD-BSU08140___yfjD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01356___yfjD
# 2: BSU08140___yfjD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     556/558 (99.6%)
# Similarity:   556/558 (99.6%)
# Gaps:           0/558 ( 0.0%)
# Score: 2772.0
# 
#
#=======================================

BSNT_01356___      1 TTGAAAAACCAAGAAATCATTGAAGTCAAAAGCAAAATGTTCCTGAGAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08140___yf      1 TTGAAAAACCAAGAAATCATTGAAGTCAAAAGCAAAATGTTCCTGAGAAT     50

BSNT_01356___     51 ATGGGCTTTTGTCGGATCTGCCGGTATGGGATTAGCATGTTTGTGGCTCT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08140___yf     51 ATGGGCTTTTGTCGGATCTGCCGGTATGGGATTAGCATGTTTGTGGCTCT    100

BSNT_01356___    101 TTTATATGGGTATTACGTTTCAAACGAAATATTACCTATTAGCCATTCCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08140___yf    101 TTTATATGGGTATTACGTTTCAAACGAAATATTACCTATTAGCCATTCCT    150

BSNT_01356___    151 GCTGGCTTTCTGTTCACCTTGTTTTGTTTATATTTATTTATCATCTTCTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08140___yf    151 GCTGGCTTTCTGTTCACCTTGTTTTGTTTATATTTATTTATCATCTTCTT    200

BSNT_01356___    201 TCCGGCTTTCACCCCGCGGGGAAATACCATTTTCCGCATCAAGACAGGAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08140___yf    201 TCCGGCTTTCACCCCGCGGGGAAATACCATTTTCCGCATCAAGACAGGAA    250

BSNT_01356___    251 AAAATGGAGAAGTGTTCACTGACAAAGTGTCTGTTACGTTTACTGATATC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08140___yf    251 AAAATGGAGAAGTGTTCACTGACAAAGTGTCTGTTACGTTTACTGATATC    300

BSNT_01356___    301 AAGAAAATTGAGATGAGCCGCCATAAATTTAGTCTAAAAGGAATTTTCCA    350
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU08140___yf    301 AAGAAAATTGAGATGAGCCGCCATAAATTTAGTCTAAAAGGAATCTTCCA    350

BSNT_01356___    351 AGAAGATATATTGATCCAAACCGTTGATCAGAAGACCATTCGCATTCCCA    400
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU08140___yf    351 AGAAGATATATTGATCCAAACCGTGGATCAGAAGACCATTCGCATTCCCA    400

BSNT_01356___    401 CTTGGAACATCATTCCGAATCCGTTGTTTTTCGAAGCGGTTGAACGCTAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08140___yf    401 CTTGGAACATCATTCCGAATCCGTTGTTTTTCGAAGCGGTTGAACGCTAT    450

BSNT_01356___    451 ATCCTTCCACATCTGAATGAAGAGGCGAAAAGCAATTGGATCGGACAGTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08140___yf    451 ATCCTTCCACATCTGAATGAAGAGGCGAAAAGCAATTGGATCGGACAGTT    500

BSNT_01356___    501 TACAGACATCCAACGCAGTGCGTATTTGAAGGAATTTGAGAATCATCCGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08140___yf    501 TACAGACATCCAACGCAGTGCGTATTTGAAGGAATTTGAGAATCATCCGA    550

BSNT_01356___    551 AGCTTTAG    558
                     ||||||||
BSU08140___yf    551 AGCTTTAG    558


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