Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01355 and BSU08130
See
Amino acid alignment /
Visit
BSNT_01355 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:18:12
# Commandline: needle
# -asequence dna-align/BSNT_01355.1.22522.seq
# -bsequence dna-align/BSU08130___yfjE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01355-BSU08130___yfjE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01355-BSU08130___yfjE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01355
# 2: BSU08130___yfjE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 543
# Identity: 403/543 (74.2%)
# Similarity: 403/543 (74.2%)
# Gaps: 84/543 (15.5%)
# Score: 1791.0
#
#
#=======================================
BSNT_01355 1 ATGATTGAAGTAAAAAGCATGATGTTTCTAAGAGCTTGGCTGTTCCTCGC 50
BSU08130___yf 0 -------------------------------------------------- 0
BSNT_01355 51 TACAGGGGGCGCTTTTATTGCAGGAGTATGGCTGGTGTCTGAAGCTCTTA 100
|||||||||||.||.|
BSU08130___yf 1 ----------------------------------GTGTCTGAAGCCCTCA 16
BSNT_01355 101 CATTTGAATCTAAGTATGCCCTGCTTTATTTGGGCGGCGGATTAATGGCG 150
|.|||||||||||.||||||||||||||||||||||||||||||.|||||
BSU08130___yf 17 CGTTTGAATCTAAATATGCCCTGCTTTATTTGGGCGGCGGATTACTGGCG 66
BSNT_01355 151 ATCGTTTATGGATTGATCACATTTTTTATGGCTTTTCCGGCGTTCACAAG 200
||..|||||||||||||||||||.||||||||||||||.|||||||||||
BSU08130___yf 67 ATGATTTATGGATTGATCACATTCTTTATGGCTTTTCCTGCGTTCACAAG 116
BSNT_01355 201 CCGGGGAAATGTCATTTTCAGCGTAAAAACAGGGCCTGATGGCGAGATTT 250
|||.||||||||||||||||.|.||||.||.||.|||..||||||.||.|
BSU08130___yf 117 CCGTGGAAATGTCATTTTCACCATAAAGACCGGACCTAGTGGCGAAATCT 166
BSNT_01355 251 TCTCTAGAAAGCGCAGCGTGATGTTTTCTGAGGTAAAACGGATTTATATG 300
|||..|||||||||||||||.|||||||.|||||.||.|||.||||||||
BSU08130___yf 167 TCTTGAGAAAGCGCAGCGTGCTGTTTTCCGAGGTGAAGCGGCTTTATATG 216
BSNT_01355 301 GGACGGCATCATTACAGCTTGAAAGGGATCTTTTTTGAAGATATTATCAT 350
|||||.|||||.|||||.||||||||||||||||||||.|||||||||||
BSU08130___yf 217 GGACGCCATCAATACAGTTTGAAAGGGATCTTTTTTGAGGATATTATCAT 266
BSNT_01355 351 CGAGAAAACAGACGGAAAAGTCGTTCGCATCCCTACTTGGAACATTATCG 400
|||||||||||||||.|||.|||||||.|||||.||.||||||||.|||.
BSU08130___yf 267 CGAGAAAACAGACGGCAAAATCGTTCGAATCCCGACCTGGAACATCATCA 316
BSNT_01355 401 CGAATCCATTGTTTTTTGAAGCGGTGGAACGCTATATCCTCCCTCATCTG 450
|||||||..|||||||.||||||||.||||||||||||||.||.|||.||
BSU08130___yf 317 CGAATCCGCTGTTTTTCGAAGCGGTTGAACGCTATATCCTTCCCCATTTG 366
BSNT_01355 451 AATGAAGAGGCGAAAAGCAACTGGATCAGCCAATTTACGGAGATTCAGCG 500
|||||||||||..|||.|||.|||||||||||||||||.|||.|||||||
BSU08130___yf 367 AATGAAGAGGCTCAAAACAATTGGATCAGCCAATTTACAGAGGTTCAGCG 416
BSNT_01355 501 CAGCGCGTATTTAAAGGAATTTGAAAATCATCCAAAGCTTTAA 543
.|..||||||||.|||||||||||.||||||||.|||||||||
BSU08130___yf 417 AAAAGCGTATTTGAAGGAATTTGAGAATCATCCGAAGCTTTAA 459
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.