Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01354 and BSU08120

See Amino acid alignment / Visit BSNT_01354 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:12
# Commandline: needle
#    -asequence dna-align/BSNT_01354___yfjF.1.22522.seq
#    -bsequence dna-align/BSU08120___yfjF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01354___yfjF-BSU08120___yfjF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01354___yfjF-BSU08120___yfjF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01354___yfjF
# 2: BSU08120___yfjF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 330
# Identity:     321/330 (97.3%)
# Similarity:   321/330 (97.3%)
# Gaps:           3/330 ( 0.9%)
# Score: 1581.0
# 
#
#=======================================

BSNT_01354___      1 ---ATGCTGGTTACCATTCTTTTATTTCTCGCGGCGGGGCTTGCCGAAAT     47
                        ||||||.|||||||||||||||||||||||||.||||||||.|||||
BSU08120___yf      1 ATGATGCTGATTACCATTCTTTTATTTCTCGCGGCAGGGCTTGCTGAAAT     50

BSNT_01354___     48 TGGCGGCGGATATCTGGTTTGGCTATGGCTGAGAGAGGCAAAGCCAGCCG     97
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU08120___yf     51 TGGCGGCGGATATCTGGTTTGGCTATGGCTGAGAGAGGCAAAGCCAGCTG    100

BSNT_01354___     98 GCTACGGAATTGCCGGGGCGCTGATCCTCATTGTATACGGCATTCTTCCG    147
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU08120___yf    101 GCTACGGAATCGCCGGGGCGCTGATCCTCATTGTATACGGCATTCTTCCG    150

BSNT_01354___    148 ACGTTTCAGTCCTTCCCATCTTTCGGCCGTGTATACGCCGCTTATGGCGG    197
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08120___yf    151 ACGTTTCAGTCCTTCCCATCTTTCGGCCGTGTATACGCCGCTTATGGCGG    200

BSNT_01354___    198 AGTATTCATCGTGCTTGCGGTCCTGTGGGGATGGCTTGTTGACCGGAAAA    247
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08120___yf    201 AGTATTCATCGTGCTTGCGGTCCTGTGGGGATGGCTTGTTGACCGGAAAA    250

BSNT_01354___    248 CACCTGATCTGTATGACTGGATCGGCGCATTCATTTGTCTCATCGGTGTA    297
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU08120___yf    251 CACCTGATCTGTATGACTGGATCGGCGCATTCATTTGTCTCATCGGTGTC    300

BSNT_01354___    298 TGTGTTATTTTATTTGCGCCGCGCGGATAA    327
                     ||||||||||||||||||||||||||||||
BSU08120___yf    301 TGTGTTATTTTATTTGCGCCGCGCGGATAA    330


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