Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01346 and BSU08070

See Amino acid alignment / Visit BSNT_01346 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:11
# Commandline: needle
#    -asequence dna-align/BSNT_01346___acoB.1.22522.seq
#    -bsequence dna-align/BSU08070___acoB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01346___acoB-BSU08070___acoB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01346___acoB-BSU08070___acoB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01346___acoB
# 2: BSU08070___acoB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1029
# Identity:    1009/1029 (98.1%)
# Similarity:  1009/1029 (98.1%)
# Gaps:           0/1029 ( 0.0%)
# Score: 4965.0
# 
#
#=======================================

BSNT_01346___      1 ATGGCGAGAGTCATAAGCATGTCAGACGCGATCAATGAAGCAATGAAGCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08070___ac      1 ATGGCGAGAGTCATAAGCATGTCAGACGCGATCAATGAAGCAATGAAGCT     50

BSNT_01346___     51 TGCGATGAGAAGAGATGAAAATGTGCTTTTGATCGGTGAGGATGTCGCCG    100
                     |||||||||||.|||.||||||||||||||||||||||||||||||||||
BSU08070___ac     51 TGCGATGAGAAAAGACGAAAATGTGCTTTTGATCGGTGAGGATGTCGCCG    100

BSNT_01346___    101 GGGGAGCGGCTGTCGATCATTTGCAGGATGATGAAGCATGGGGCGGTGTA    150
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU08070___ac    101 GGGGAGCGGCGGTCGATCATTTGCAGGATGATGAAGCATGGGGCGGTGTA    150

BSNT_01346___    151 TTAGGGGTCACAAAGGGGCTCGTACAGGAATTCGGGCGTACAAGAGTGCT    200
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU08070___ac    151 TTAGGGGTCACAAAGGGACTCGTACAGGAATTCGGGCGTACAAGAGTGCT    200

BSNT_01346___    201 GGACACACCGATTTCTGAGGCGGGCTATATGGGTGCGGCTATGGCTGCGG    250
                     ||||||.||||||||||||||.|||||||||||.||||||||||||||||
BSU08070___ac    201 GGACACTCCGATTTCTGAGGCAGGCTATATGGGAGCGGCTATGGCTGCGG    250

BSNT_01346___    251 CATCAACCGGTTTGAGACCGATTGCCGAGCTGATGTTTAACGATTTTATC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08070___ac    251 CATCAACCGGTTTGAGACCGATTGCCGAGCTGATGTTTAACGATTTTATC    300

BSNT_01346___    301 GGCACGTGCTTTGACCAGGTGATCAACCAAGGGGCGAAATTCCGTTACAT    350
                     ||||||||||||||.||||||||||||||||||||||||||||||||.||
BSU08070___ac    301 GGCACGTGCTTTGATCAGGTGATCAACCAAGGGGCGAAATTCCGTTATAT    350

BSNT_01346___    351 GTTTGGCGGAAAAGCGCAAGTGCCGATTACCGTCCGCACCACATACGGAG    400
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU08070___ac    351 GTTCGGCGGAAAAGCGCAAGTGCCGATTACCGTCCGCACCACATACGGAG    400

BSNT_01346___    401 CAGGGTTCCGGGCCGCTGCCCAGCATTCACAAGCGCTGTATGGCCTTTTC    450
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU08070___ac    401 CAGGGTTCCGGGCCGCTGCCCAGCATTCACAATCGCTGTATGGCCTTTTC    450

BSNT_01346___    451 ACGAGCATCCCTGGACTGAAGACAGTTGTTCCATCCAATCCGTATGATGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08070___ac    451 ACGAGCATCCCTGGACTGAAGACAGTTGTTCCATCCAATCCGTATGATGC    500

BSNT_01346___    501 CAAAGGTCTTCTGCTTGCAGCAATAGAAGATAATGATCCGGTGTTCTTCT    550
                     ||||||||||.||||||||||||||||||||||||||||||||||.||||
BSU08070___ac    501 CAAAGGTCTTTTGCTTGCAGCAATAGAAGATAATGATCCGGTGTTTTTCT    550

BSNT_01346___    551 TTGAAGACAAAACGTCCTACAACATGAAGGGCGAGGTGCCGGAAGATTAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08070___ac    551 TTGAAGACAAAACGTCCTACAACATGAAGGGCGAGGTGCCGGAAGATTAT    600

BSNT_01346___    601 TATACAATTCCCCTTGGAAAAGCGGATATCAAACGCGAGGGCAATGATGT    650
                     ||||||||||||||.|||||||||||||||||||||||.|||||||||||
BSU08070___ac    601 TATACAATTCCCCTCGGAAAAGCGGATATCAAACGCGAAGGCAATGATGT    650

BSNT_01346___    651 TACGCTCTTTGCAGTCGGCAAGCAGGTCAATACTGCGCTTGAAGCGGCTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08070___ac    651 TACGCTCTTTGCAGTCGGCAAGCAGGTCAATACTGCGCTTGAAGCGGCTG    700

BSNT_01346___    701 CACAGCTTTCAGAGAGGGGCATCGAAGCCGAGGTCCTTGATCCGCGCAGT    750
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU08070___ac    701 CACAGCTTTCAGAGAGGGGCATCGAAGCCGAGGTCCTTGATCCCCGCAGT    750

BSNT_01346___    751 CTGTCCCCTCTGGATGAGGATGCGATTTTCACATCGTTAGAAAAAACAAA    800
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU08070___ac    751 CTGTCTCCTCTGGATGAGGATGCGATTTTCACATCGTTAGAAAAAACAAA    800

BSNT_01346___    801 TCGTCTGATCATCATTGATGAAGCCAATCCGCGATGCAGCATTGCCACGG    850
                     .||.||||||||||||||||||||||||||||||||||||||||||||||
BSU08070___ac    801 CCGGCTGATCATCATTGATGAAGCCAATCCGCGATGCAGCATTGCCACGG    850

BSNT_01346___    851 ATATTGCTGCGCTTGTCGCTGACAAGGGCTTTGATTTGCTTGATGCGCCG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08070___ac    851 ATATTGCTGCGCTTGTCGCTGACAAGGGCTTTGATTTGCTTGATGCGCCG    900

BSNT_01346___    901 ATTAAACGGATTACAGCGCCGCATACACCGGTTCCGTTTTCACCAGTGCT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08070___ac    901 ATTAAACGGATTACAGCGCCGCATACACCGGTTCCGTTTTCACCAGTGCT    950

BSNT_01346___    951 TGAAGATCAATATTTGCCGACACCAGATAAAATTGTCAGCGTCACGCTTG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08070___ac    951 TGAAGATCAATATTTGCCGACACCAGATAAAATTGTCAGCGTCACGCTTG   1000

BSNT_01346___   1001 AATTGCTTGGCGAGCCGGCAATGAATTAA   1029
                     ||||||||||||||||||||.||||||||
BSU08070___ac   1001 AATTGCTTGGCGAGCCGGCATTGAATTAA   1029


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01346 and BSU08070

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
