Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01340 and BSU08030

See Amino acid alignment / Visit BSNT_01340 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:10
# Commandline: needle
#    -asequence dna-align/BSNT_01340___yfjN.1.22522.seq
#    -bsequence dna-align/BSU08030___dusC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01340___yfjN-BSU08030___dusC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01340___yfjN-BSU08030___dusC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01340___yfjN
# 2: BSU08030___dusC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 999
# Identity:     936/999 (93.7%)
# Similarity:   936/999 (93.7%)
# Gaps:          21/999 ( 2.1%)
# Score: 4512.0
# 
#
#=======================================

BSNT_01340___      1 ATGAAAGGATTTGAATGTATTATGACAGATAATTTCTGGCGTGAATTGCC     50
                                          ||||||||.|||||||||||||||||.||
BSU08030___du      1 ---------------------ATGACAGAAAATTTCTGGCGTGAATTACC     29

BSNT_01340___     51 ACGGCCATTTTTTGTACTGGCACCAATGGAAGATGTGACAGATGTTGTTT    100
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU08030___du     30 ACGGCCGTTTTTTGTACTGGCACCAATGGAAGATGTGACAGATGTTGTTT     79

BSNT_01340___    101 TCCGGCATGTAGTAAGTGAAGCAGGCAGACCGGATGTATTTTTTACAGAG    150
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU08030___du     80 TCCGGCATGTAGTAAGTGAAGCAGGCAGACCGGATGTGTTTTTTACAGAG    129

BSNT_01340___    151 TTCACAAACTCAGAGAGCTATTGCCACCCGGATGGGAAGGATAGTGTGCG    200
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU08030___du    130 TTCACAAACTCAGAGAGCTATTGCCACCCGGATGGGAAGGATAGCGTGCG    179

BSNT_01340___    201 TGGCCGTTTGACGTTTACAGAGGATGAACAGCCAATGGTAGCCCACATAT    250
                     .|||||||||||.|||||||||||||||||||||||.||.|||||.||||
BSU08030___du    180 CGGCCGTTTGACTTTTACAGAGGATGAACAGCCAATTGTGGCCCATATAT    229

BSNT_01340___    251 GGGGGGATAAGCCTGAAAACTTCCGTAAAATGAGTATTGGCATGGCAGAG    300
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU08030___du    230 GGGGAGATAAGCCTGAAAACTTCCGTAAAATGAGTATTGGCATGGCAGAG    279

BSNT_01340___    301 TTAGGATTTAAAGGCTTAGATATCAATATGGGCTGCCCTGTACCTAATGT    350
                     ||||||||||||||..|||||||||||||||||||||||||.||||||||
BSU08030___du    280 TTAGGATTTAAAGGACTAGATATCAATATGGGCTGCCCTGTGCCTAATGT    329

BSNT_01340___    351 GGCAGGGAATGGAAAGGGAAGCGGCCTTATTTGCCGTCCTGCAGTGGCGG    400
                     |||.|||||||||||||||||||||||||||||||||||||||||.||||
BSU08030___du    330 GGCGGGGAATGGAAAGGGAAGCGGCCTTATTTGCCGTCCTGCAGTTGCGG    379

BSNT_01340___    401 CAGAATTAATACAAGCTGCAAAAGCAGGGGGATTGCCTGTAAGCGTGAAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08030___du    380 CAGAATTAATACAAGCTGCAAAAGCAGGGGGATTGCCTGTAAGCGTGAAG    429

BSNT_01340___    451 ACAAGACTTGGATACACGGATGTGGATGAATGGCGCGAGTGGCTGACACA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08030___du    430 ACAAGACTTGGATACACGGATGTGGATGAATGGCGCGAGTGGCTGACACA    479

BSNT_01340___    501 CATTTTGAAACAGGATATTGCGAATCTTTCTATTCATCTGCGTACAAGGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08030___du    480 CATTTTGAAACAGGATATTGCGAATCTTTCTATTCATCTGCGTACAAGGG    529

BSNT_01340___    551 CAGAAATGAGCAAAGTAGATGCGCATTGGGAGCTCATCCCGGAGATTAAG    600
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU08030___du    530 CAGAAATGAGCAAAGTAGATGCGCATTGGGAGCTCATCCCAGAGATTAAG    579

BSNT_01340___    601 AAACTTCGTGATGAGGTGGCACCAGATACACTGTTGACAATCAACGGAGA    650
                     |||||||||||.||||||||||||||||||.||.|.|||||.|||||.||
BSU08030___du    580 AAACTTCGTGACGAGGTGGCACCAGATACATTGCTAACAATAAACGGGGA    629

BSNT_01340___    651 TATCCCTGACCGCCAAACCGGCTTGAAACTTGCTGAACAATACGGCGTCG    700
                     |||.||||||||.|||||.|||||||||||||||||||||||||||||||
BSU08030___du    630 TATTCCTGACCGTCAAACTGGCTTGAAACTTGCTGAACAATACGGCGTCG    679

BSNT_01340___    701 ATGGCATTATGATAGGGCGCGGTATTTTTACAAATCCATTTGCCTTTGAA    750
                     ||||.||||||||||||||||||||||||||||||||.||.||.||||||
BSU08030___du    680 ATGGAATTATGATAGGGCGCGGTATTTTTACAAATCCTTTCGCTTTTGAA    729

BSNT_01340___    751 AAGGAGCCGAAAGAGCATAGCAGCAAGGAATTGCTTGATCTCTTAAGGCT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08030___du    730 AAGGAGCCGAAAGAGCATAGCAGCAAGGAATTGCTTGATCTCTTAAGGCT    779

BSNT_01340___    801 GCATCTGGATCTTCATGAGAAATATTCAGCATTAGAAGCCCGTCCGTACA    850
                     ||||||||||||.|||||..||||||||..|..||||||||||||.||||
BSU08030___du    780 GCATCTGGATCTCCATGATGAATATTCAAAAGAAGAAGCCCGTCCATACA    829

BSNT_01340___    851 AGCCTCTTCCTCGCTTTTTCAAAATTTATCTCCGCGGGTTCCGAGGGGCA    900
                     ||||||||||||||||||||||.||||||||||||||.||||||||||||
BSU08030___du    830 AGCCTCTTCCTCGCTTTTTCAAGATTTATCTCCGCGGATTCCGAGGGGCA    879

BSNT_01340___    901 AGTGAATTAAGAAATCAATGCATGAACACAAAGTCAACAGATGAAGTGCG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08030___du    880 AGTGAATTAAGAAATCAATGCATGAACACAAAGTCAACAGATGAAGTGCG    929

BSNT_01340___    951 TGCATTGCTCGACGACTTTGAGAGAAAGTATCTTGATGGGGTAGAATAA    999
                     ||||||||||||||||||||||||||||||||||||||||.||||.|||
BSU08030___du    930 TGCATTGCTCGACGACTTTGAGAGAAAGTATCTTGATGGGATAGAGTAA    978


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01340 and BSU08030

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
