Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01336 and BSU08000

See Amino acid alignment / Visit BSNT_01336 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:10
# Commandline: needle
#    -asequence dna-align/BSNT_01336___yfjQ.1.22522.seq
#    -bsequence dna-align/BSU08000___yfjQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01336___yfjQ-BSU08000___yfjQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01336___yfjQ-BSU08000___yfjQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01336___yfjQ
# 2: BSU08000___yfjQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 960
# Identity:     947/960 (98.6%)
# Similarity:   947/960 (98.6%)
# Gaps:           0/960 ( 0.0%)
# Score: 4683.0
# 
#
#=======================================

BSNT_01336___      1 ATGATCAACATTACCGCAATCACAACAGAGCATCAGCTGCTGAAAAATAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08000___yf      1 ATGATCAACATTACCGCAATCACAACAGAGCATCAGCTGCTGAAAAATAT     50

BSNT_01336___     51 ACCGATCGAACGAGTGGAACAGCCTGATATTGCATGGTACTGGGTTGATT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08000___yf     51 ACCGATCGAACGAGTGGAACAGCCTGATATTGCATGGTACTGGGTTGATT    100

BSNT_01336___    101 TTTACGGCCCGGAGGATACGGAAACGGCGTTATTGAGAGATTTTTTTCAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08000___yf    101 TTTACGGCCCGGAGGATACGGAAACGGCGTTATTGAGAGATTTTTTTCAT    150

BSNT_01336___    151 TTTCACCCGCTTGCCATTGAGGATTGCTTCCAGCACATGCAGCGGCCGAA    200
                     |||||||||||||||||||||||||||||||||||.|||||||||||.||
BSU08000___yf    151 TTTCACCCGCTTGCCATTGAGGATTGCTTCCAGCATATGCAGCGGCCAAA    200

BSNT_01336___    201 GCTTGACCATTATGACGGCTATCGTTTTTACGTGATTCATGCGCTGAATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08000___yf    201 GCTTGACCATTATGACGGCTATCGTTTTTACGTGATTCATGCGCTGAATA    250

BSNT_01336___    251 AGGAAACACTTGAGACGGAGGAAGTCGATATCTTTCAAGGCGAAAAATTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08000___yf    251 AGGAAACACTTGAGACGGAGGAAGTCGATATCTTTCAAGGCGAAAAATTT    300

BSNT_01336___    301 GTCGTCACCTTTCATTTACACGAAACGCCAGGTATCGCTAAAGTCCGGGA    350
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU08000___yf    301 GTCGTCACCTTTCATTTACACGAAACGCCCGGTATCGCTAAAGTCCGGGA    350

BSNT_01336___    351 GCGTTTGTATGCTTCACCGGATATATTGAAAAAAGGGCCCGGGCATATTT    400
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU08000___yf    351 GCGTTTGTATGCTTCACCGGACATATTGAAAAAAGGGCCCGGGCATATTT    400

BSNT_01336___    401 CTTATATGATCATGGATCAGCTTGTTGATGAATATTTTCCTCTCGTGTAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08000___yf    401 CTTATATGATCATGGATCAGCTTGTTGATGAATATTTTCCTCTCGTGTAT    450

BSNT_01336___    451 AAAATCGAAGACCGGCTGAATGAAATTGAAGAAAGCCGTCCCCACAAAAC    500
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU08000___yf    451 AAAATTGAAGACCGGCTGAATGAAATTGAAGAAAGCCGTCCCCACAAAAC    500

BSNT_01336___    501 GTATGGAATGCTGATGAACGAGGTGTTTGATCTCAGAACAGACCTATTGC    550
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU08000___yf    501 GTATGGAACGCTGATGAACGAGGTGTTTGATCTCAGAACAGACCTATTGC    550

BSNT_01336___    551 ATTTAAGACGGACGATTATCCCGATGCGTGATTTGCTCTACCGGATTTTA    600
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU08000___yf    551 ATTTGAGACGGACGATTATCCCGATGCGTGATTTGCTCTACCGGATTTTA    600

BSNT_01336___    601 AGCCTTGACCATGTGAAAGAGCAGCGGGAGACGAAAGCCTATTTCAGCGA    650
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU08000___yf    601 AGCCTTGACCATGTGAAAGAGCAGCGGGAAACGAAAGCCTATTTCAGCGA    650

BSNT_01336___    651 CATATATGATCATTTGTTAAAGTTGTCTGAAATTGTGGAATCCAACCGTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08000___yf    651 CATATATGATCATTTGTTAAAGTTGTCTGAAATTGTGGAATCCAACCGTG    700

BSNT_01336___    701 ACATGACGTCCGACTTGCGTGACAGCTACGTGACGCTAAACTCAAACCGG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08000___yf    701 ACATGACGTCCGACTTGCGTGACAGCTACGTGACGCTAAACTCAAACCGG    750

BSNT_01336___    751 ATGAATGCGATTATGATGACACTGACGATCGTATCAACCATTTTCATCCC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU08000___yf    751 ATGAATGCGATTATGATGACACTGACGATCGTATCAACCATTTTCATCCC    800

BSNT_01336___    801 GCTCACCTTTATTACCGGTGTATACGGTATGAACTTCGACTTTATGCCGG    850
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU08000___yf    801 GCTCACCTTTATTGCCGGTGTATACGGTATGAACTTCGACTTTATGCCGG    850

BSNT_01336___    851 AGCTGCATTGGAAATACGGATATTTCGCTGTACTTGGCCTGATGGCTGCG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU08000___yf    851 AGCTGCATTGGAAATACGGATATTTCGCTGTACTTGGCCTGATGGCCGCG    900

BSNT_01336___    901 CTTGTGATTGGAATGCTGATTTGGTTTAGATATAAAGGATGGTTCAATAT    950
                     |||||||||||||||||||||||||||..|.|||||||||||||||||||
BSU08000___yf    901 CTTGTGATTGGAATGCTGATTTGGTTTGTACATAAAGGATGGTTCAATAT    950

BSNT_01336___    951 TTTTAAATGA    960
                     ||||||||||
BSU08000___yf    951 TTTTAAATGA    960


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01336 and BSU08000

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
