Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01333 and BSU07990

See Amino acid alignment / Visit BSNT_01333 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:10
# Commandline: needle
#    -asequence dna-align/BSNT_01333___yfjR.1.22522.seq
#    -bsequence dna-align/BSU07990___yfjR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01333___yfjR-BSU07990___yfjR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01333___yfjR-BSU07990___yfjR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01333___yfjR
# 2: BSU07990___yfjR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 861
# Identity:     854/861 (99.2%)
# Similarity:   854/861 (99.2%)
# Gaps:           0/861 ( 0.0%)
# Score: 4242.0
# 
#
#=======================================

BSNT_01333___      1 TTGAAAATTGCTGTCATCGGACTCGGCAATATGGGACAGCCCATTGCCCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07990___yf      1 TTGAAAATTGCTGTCATCGGACTCGGCAATATGGGACAGCCCATTGCCCG     50

BSNT_01333___     51 AAATGTTCTTCAAGCAGGCTACGAATTGACTGTCTATAACCGGACGAAAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07990___yf     51 AAATGTTCTTCAAGCAGGCTACGAATTGACTGTCTATAACCGGACGAAAC    100

BSNT_01333___    101 AAAAGACAGAAGAACTTGTCACAGAAGGCGCACAGGCAGCTGATACGCCG    150
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU07990___yf    101 AAAAGACAGAAGACCTTGTCACAGAAGGCGCACAGGCAGCTGATACGCCG    150

BSNT_01333___    151 CGGCTGGCGGCAAAGTCCGCTGATATTGTCATCACAATGCTTGCAGATGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07990___yf    151 CGGCTGGCGGCAAAGTCCGCTGATATTGTCATCACAATGCTTGCAGATGA    200

BSNT_01333___    201 TGATTCTGTCAGCACCGTGACATTCGGAGAAGACGGGCTGCTTGAAGGAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07990___yf    201 TGATTCTGTCAGCACCGTGACATTCGGAGAAGACGGGCTGCTTGAAGGAT    250

BSNT_01333___    251 TAGCAGAGAACGGCATTCACATCTCGATGAGCACAATCAGTGTTGAGTTC    300
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU07990___yf    251 TAGCAGAGAACGGCATACACATCTCGATGAGCACAATCAGTGTTGAGTTC    300

BSNT_01333___    301 TCAGAAAAGCTCGCAGCGGCTCATGCAGAGAAAGGACAATTTTTTCTCGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07990___yf    301 TCAGAAAAGCTCGCAGCGGCTCATGCAGAGAAAGGACAATTTTTTCTCGC    350

BSNT_01333___    351 CGCTCCTGTCCTTGGCAGACCGGATGCCGCAGCCAAAGCCGCGCTCCGTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07990___yf    351 CGCTCCTGTCCTTGGCAGACCGGATGCCGCAGCCAAAGCCGCGCTCCGTA    400

BSNT_01333___    401 TCATAACAGCCGGACCGGCGGAAGCAAAGCAAGCTGCCAAGCCTCTGCTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07990___yf    401 TCATAACAGCCGGACCGGCGGAAGCAAAGCAAGCTGCCAAGCCTCTGCTC    450

BSNT_01333___    451 GACAGCCTGAGCCAGCAGGTATTTGACGTCGGCGAAGAAAGCAAGACGGC    500
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU07990___yf    451 GACAGCCTGAGCCAGCAGATATTTGACGTCGGCGAAGAAAGCAAGACGGC    500

BSNT_01333___    501 AAATGCAGCCAAAATCAGCATCAATTTCTTGCTCGTGTCCATGCTGGAGG    550
                     |||||||||||||||||||||.|||||||||||.||||||||||||||||
BSU07990___yf    501 AAATGCAGCCAAAATCAGCATTAATTTCTTGCTTGTGTCCATGCTGGAGG    550

BSNT_01333___    551 CGTTATCTGAATCCTTCTTAATGATGGAGAAATACGGCTTAGAACAAAAA    600
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU07990___yf    551 CGTTATCTGAATCCTTTTTAATGATGGAGAAATACGGCTTAGAACAAAAA    600

BSNT_01333___    601 CAATTTTTAGAAATCGCCAGCGCGCTCTTTGGTTCTCCAGTCTATCAAAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07990___yf    601 CAATTTTTAGAAATCGCCAGCGCGCTCTTTGGTTCTCCAGTCTATCAAAA    650

BSNT_01333___    651 TTACGGAACCATTATGGCCGAGCAGAAATTTGAGCCGGCCGGCTTCAAAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07990___yf    651 TTACGGAACCATTATGGCCGAGCAGAAATTTGAGCCGGCCGGCTTCAAAA    700

BSNT_01333___    701 TGTCTTTAGGGCTGAAGGATACCAACCTGGCACTCGCCGCCGCAAAACGG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07990___yf    701 TGTCTTTAGGGCTGAAGGATACCAACCTGGCACTCGCCGCCGCAAAACGG    750

BSNT_01333___    751 GTTTCTGCAAATCTTCCTCTTGCCGAGCTGGCCAAGAGCCATTTTGAAAA    800
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU07990___yf    751 GTTTCTGCAAATCTTCCTCTTGCCGAGCTGGCCAAGAGCCATTTTGAAAG    800

BSNT_01333___    801 CGGGATTGAGAAAGGCTTCGGGGATCTGGACTGGGCCGCACTGATTAAAT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07990___yf    801 CGGGATTGAGAAAGGCTTCGGGGATCTGGACTGGGCCGCACTGATTAAAT    850

BSNT_01333___    851 GTATAAAATAA    861
                     |||||||||||
BSU07990___yf    851 GTATAAAATAA    861


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01333 and BSU07990

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
