Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01328 and BSU07940

See Amino acid alignment / Visit BSNT_01328 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:09
# Commandline: needle
#    -asequence dna-align/BSNT_01328___yfkC.1.22522.seq
#    -bsequence dna-align/BSU07940___yfkC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01328___yfkC-BSU07940___yfkC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01328___yfkC-BSU07940___yfkC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01328___yfkC
# 2: BSU07940___yfkC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 843
# Identity:     833/843 (98.8%)
# Similarity:   833/843 (98.8%)
# Gaps:           6/843 ( 0.7%)
# Score: 4149.0
# 
#
#=======================================

BSNT_01328___      1 ------ATGAAAGAAACACTTACGGAGATTTTTCAAAATAAAATCGTCGA     44
                           ||||||||||||||||||||||||||||||||||||||||||||
BSU07940___yf      1 ATGCGGATGAAAGAAACACTTACGGAGATTTTTCAAAATAAAATCGTCGA     50

BSNT_01328___     45 TATTCTCCTCGTTGCCGTTATCCTTTGGATCGGTGTCTTTATCATCAACC     94
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07940___yf     51 TATTCTCCTCGTTGCCGTTATCCTTTGGATCGGTGTCTTTATCATCAACC    100

BSNT_01328___     95 GGCTGGTACAGCTATTTTTTAAACGGACGGATTTTATTGAAGAAAAAAAG    144
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU07940___yf    101 GGCTGGTACAGCTATTTTTTAAACGGACGGACTTTATTGAAGAAAAAAAG    150

BSNT_01328___    145 GAAAAAACGATTGAAAGCCTTGTCCGTTCTGTCACCCAGTATACGGCGAC    194
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU07940___yf    151 GAAAAAACGATTGAAAGCCTTGTCCGTTCTGTCACCCAGTATACGGCAAC    200

BSNT_01328___    195 AATTGGTTTTATCTTTTACGTTATTTCTTTATTTGTGCATGATTTCGGCA    244
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07940___yf    201 AATTGGTTTTATCTTTTACGTTATTTCTTTATTTGTGCATGATTTCGGCA    250

BSNT_01328___    245 AGATATTGGCCGGGGCGGGCGTAGCAGGTATCGTGATCGGTTTTGGCGCC    294
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07940___yf    251 AGATATTGGCCGGGGCGGGCGTAGCAGGTATCGTGATCGGTTTTGGCGCC    300

BSNT_01328___    295 CAATCGCTGATCAAAGATGTGCTGGCTGGTGTGTTCTTAATATATGAACG    344
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU07940___yf    301 CAATCGCTGATCAAAGATGTGCTGGCTGGTGTATTCTTAATATATGAACG    350

BSNT_01328___    345 CCAGCTGCACAAAGGCGATTATGTCACCGTCAACAACTTGTTCAACGGGA    394
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07940___yf    351 CCAGCTGCACAAAGGCGATTATGTCACCGTCAACAACTTGTTCAACGGGA    400

BSNT_01328___    395 CAGTGGAGGAAATCGGCCTCCGCTCGCTGCAAATCCGGGAATGGAGCGGG    444
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07940___yf    401 CAGTGGAGGAAATCGGCCTCCGCTCGCTGCAAATCCGGGAATGGAGCGGG    450

BSNT_01328___    445 AAGCTGCTCACCATCAGCAACGGCGAGGTCAGACAAATAGAGAACTATAA    494
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07940___yf    451 AAGCTGCTCACCATCAGCAACGGCGAGGTCAGACAAATAGAGAACTATAA    500

BSNT_01328___    495 TATTGATTTTATGCGGATTACCGAATCCTTTCTTATCAGCTTTAAAGAAG    544
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07940___yf    501 TATTGATTTTATGCGGATTACCGAATCCTTTCTTATCAGCTTTAAAGAAG    550

BSNT_01328___    545 ATCCGGACCGCGTGTACAGCGTGTTGGAAGAGGCATGTGACATGCTGAAT    594
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07940___yf    551 ATCCGGACCGCGTGTACAGCGTGTTGGAAGAGGCATGTGACATGCTGAAT    600

BSNT_01328___    595 GAAGAGCTTCGTGATTCATTGAAGCGGGATGAATTCGGCAATCCGACAGA    644
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07940___yf    601 GAAGAGCTTCGTGATTCATTGAAGCGGGATGAATTCGGCAATCCGACAGA    650

BSNT_01328___    645 ACCGTTTCAAATCCACGGCATCACCGCATTGAATAAAATCAATCGCGGCG    694
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07940___yf    651 ACCGTTTCAAATCCACGGCATCACCGCATTGAATAAAATCAATCGCGGCG    700

BSNT_01328___    695 TCGAATTTACGGTTAAAGGCATGGTGAAAGATGATGATTATTTCAGTGCC    744
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07940___yf    701 TCGAATTTACGGTTAAAGGCATGGTGAAAGATGATGATTATTTCAGTGCC    750

BSNT_01328___    745 AGCCTTGCAGTCAGACGGGTTCTCGTTCGCCAGCTCTACCAAAACAATGT    794
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU07940___yf    751 AGCCTTGCAGTAAGACGGGTTCTCGTTCGCCAGCTCTACCAAAACAATGT    800

BSNT_01328___    795 GCAAATGCTTGAGGAAGCGGTCCGAATCGAGAGAACCCAATAA    837
                     |||||||||||||||||||||||||||||||||||||||||||
BSU07940___yf    801 GCAAATGCTTGAGGAAGCGGTCCGAATCGAGAGAACCCAATAA    843


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