Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01327 and BSU07930

See Amino acid alignment / Visit BSNT_01327 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:09
# Commandline: needle
#    -asequence dna-align/BSNT_01327___yfkD.1.22522.seq
#    -bsequence dna-align/BSU07930___yfkD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01327___yfkD-BSU07930___yfkD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01327___yfkD-BSU07930___yfkD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01327___yfkD
# 2: BSU07930___yfkD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 795
# Identity:     785/795 (98.7%)
# Similarity:   785/795 (98.7%)
# Gaps:           0/795 ( 0.0%)
# Score: 3885.0
# 
#
#=======================================

BSNT_01327___      1 ATGATGAAAAAGCTATTTCATTCCACACTTATCGTGTTGTTATTCTTTAG     50
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU07930___yf      1 ATGATGAAAAAGCTATTTCATTCCACACTTATTGTGTTGTTATTCTTTAG     50

BSNT_01327___     51 TTTTTTCGGCGTTCAGCCCATCCACGCGAAAAAGCAGTTTAAGGTTCCTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07930___yf     51 TTTTTTCGGCGTTCAGCCCATCCACGCGAAAAAGCAGTTTAAGGTTCCTA    100

BSNT_01327___    101 ATTCTGTCGCAAGCATTTCAAAGGAAAACACGTATCCGAATGCTTCGCAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU07930___yf    101 ATTCTGTCGCAAGCATTTCAAAGGAAAACACGTATCCGAATGCTTCACAG    150

BSNT_01327___    151 GATCAGCCAATGCTTCAGCCGAGCAAGCTGGCAAAGGAATTGCTCGATCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07930___yf    151 GATCAGCCAATGCTTCAGCCGAGCAAGCTGGCAAAGGAATTGCTCGATCA    200

BSNT_01327___    201 TTCTGAGGTGAAGATTGAAAATCCGCATCTCATCAAAATGCTGAATGAAT    250
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU07930___yf    201 TTCTGAGGTAAAGATTGAAAATCCGCATCTCATCAAAATGCTGAATGAAT    250

BSNT_01327___    251 CCAACATATCCGGCACACCGCTTGCAGTAGGGTACCGGGCGACAATATTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07930___yf    251 CCAACATATCCGGCACACCGCTTGCAGTAGGGTACCGGGCGACAATATTT    300

BSNT_01327___    301 CTCGGGAAATGGGCGCTCGGCTATGAATCAAATGAAACAGTCGCAAACTG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07930___yf    301 CTCGGGAAATGGGCGCTCGGCTATGAATCAAATGAAACAGTCGCAAACTG    350

BSNT_01327___    351 GGAGTATAAAAAAATCAATACAAACCGTGCGGATAACCGCGGCGGGAAAG    400
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU07930___yf    351 GGAATATAAAAAAATCAATACAAACCGTGCGGATAACCGCGGCGGGAAAG    400

BSNT_01327___    401 AAACGGCTGAAATGCATTATGCCCAGGAACAGCAGTACAGAGTGAAGGGC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07930___yf    401 AAACGGCTGAAATGCATTATGCCCAGGAACAGCAGTACAGAGTGAAGGGC    450

BSNT_01327___    451 GGCCTGACAGCTAAAGTTCCAAATGCTGAAGATGTCAAAAGCATGATGAT    500
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU07930___yf    451 GGCTTGACAGCTAAAGTTCCAAATGCTGAAGATGTCAAAAGCATGATGAT    500

BSNT_01327___    501 GCAAAAAGCAATGAAGAAAACGAACCTTCCGCTTGCATTTGAGACGGTCA    550
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU07930___yf    501 GCAAAAAGCAATGAAGAAAACGAACCTCCCGCTTGCATTTGAGACGGTCA    550

BSNT_01327___    551 TTGGGGCTGGCACAAAACGGGATCAGATTTATAAAGTCGCTCCTAAAAAA    600
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU07930___yf    551 TCGGGGCTGGCACAAAACGGGATCAGATTTATAAAGTCGCTCCTAAAAAA    600

BSNT_01327___    601 ATCGGTTATTTACATGCATATGCACCGGCTGTGAATGAAAAAGGAAAAGT    650
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU07930___yf    601 ATCGGTTATCTACATGCATATGCACCGGCTGTGAATGAAAAAGGAAAAGT    650

BSNT_01327___    651 GACTTACGGAGAAGTGTACTTAGTGCTGAAAGGAAATAAACGAAAACTCG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07930___yf    651 GACTTACGGAGAAGTGTACTTAGTGCTGAAAGGAAATAAACGAAAACTCG    700

BSNT_01327___    701 TCGTGAAAAATGTCACGTCACAGGGAATCGGCGCGTGGATTCCAGTTCAA    750
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU07930___yf    701 TCGTGAAAAATGTCACGTCACAGGGAATCGGCGCGTGGATTCCGGTTCAA    750

BSNT_01327___    751 GATCATGTCACGTTTGGTTTTCAGCTTTCCTCACTGCCAAGATAA    795
                     |||||||||||||||||.|||||||||||||||||||||||||||
BSU07930___yf    751 GATCATGTCACGTTTGGCTTTCAGCTTTCCTCACTGCCAAGATAA    795


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