Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01261 and BSU07410

See Amino acid alignment / Visit BSNT_01261 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:18:00
# Commandline: needle
#    -asequence dna-align/BSNT_01261.1.22522.seq
#    -bsequence dna-align/BSU07410___yfmN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01261-BSU07410___yfmN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01261-BSU07410___yfmN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01261
# 2: BSU07410___yfmN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     149/239 (62.3%)
# Similarity:   149/239 (62.3%)
# Gaps:          85/239 (35.6%)
# Score: 714.5
# 
#
#=======================================

BSNT_01261         1 ATGGATAAGGCAAAGCCAGACGAATATGATCAGAAATGTTTAGAAACGCT     50
                     ||||||||||||||.||.||||||||||||||||||||||||||||||||
BSU07410___yf      1 ATGGATAAGGCAAAACCTGACGAATATGATCAGAAATGTTTAGAAACGCT     50

BSNT_01261        51 CTATCAATACATACACAGCGTCATGAAAAACAGCTTT--TCGCCCGAGTG     98
                     |||||||||||||||||||||||||||||||||||||  |||..||||||
BSU07410___yf     51 CTATCAATACATACACAGCGTCATGAAAAACAGCTTTTCTCGGTCGAGTG    100

BSNT_01261        99 GTTTACCGCTTGGGCAGATGAGGAGGATTTTGAGCTGTCTGCCAAAAGAG    148
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU07410___yf    101 GTTTACCGCTTGGGAAGATGAGGAGGATTTTGAGCTGTCTGCCAAAAGAG    150

BSNT_01261       149 AGCTGACACTTGATGAATTCACATCTCCATTGCAGCTCATTTTAAAAGAC    198
                     ||||||                                            
BSU07410___yf    151 AGCTGA--------------------------------------------    156

BSNT_01261       199 AGAGAGCTTTTGAGAGTCGTTCAGAATAAATGGCAGTAA    237
                                                            
BSU07410___yf    156 ---------------------------------------    156


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