Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01253 and BSU07360

See Amino acid alignment / Visit BSNT_01253 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:59
# Commandline: needle
#    -asequence dna-align/BSNT_01253___yfmS.1.22522.seq
#    -bsequence dna-align/BSU07360___yfmS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01253___yfmS-BSU07360___yfmS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01253___yfmS-BSU07360___yfmS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01253___yfmS
# 2: BSU07360___yfmS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 861
# Identity:     853/861 (99.1%)
# Similarity:   853/861 (99.1%)
# Gaps:           0/861 ( 0.0%)
# Score: 4233.0
# 
#
#=======================================

BSNT_01253___      1 ATGGAATTGACCATAAATACGGAAAAAGAAACCGCAGATATTCTGGACGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07360___yf      1 ATGGAATTGACCATAAATACGGAAAAAGAAACCGCAGATATTCTGGACGC     50

BSNT_01253___     51 ATTTATCAAAGTAGCCCCTTATTTAAACAGCCTGGTTCAGGATGATATTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07360___yf     51 ATTTATCAAAGTAGCCCCTTATTTAAACAGCCTGGTTCAGGATGATATTA    100

BSNT_01253___    101 CAATCGGCATTTATGATACGGAAAAACTGCTCGTGAATATACCGGCCAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07360___yf    101 CAATCGGCATTTATGATACGGAAAAACTGCTCGTGAATATACCGGCCAAA    150

BSNT_01253___    151 ACCTTTTCGCTGAACGTAAAAGCCGGCGATCCGCTGCAGGAAGGGGATAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07360___yf    151 ACCTTTTCGCTGAACGTAAAAGCCGGCGATCCGCTGCAGGAAGGGGATAT    200

BSNT_01253___    201 CATCACAGATGCCATCCGAAGCAATCAGAAGAAGACGAGCATGGTTCCGA    250
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU07360___yf    201 CATCACAGATGCCATCCGCAGCAATCAGAAGAAGACGAGCATGGTTCCGA    250

BSNT_01253___    251 AAGAATTGTTCGGCTTCCCATTGATCGCGCGTGCCATCCCGCTGCACGAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07360___yf    251 AAGAATTGTTCGGCTTCCCATTGATCGCGCGTGCCATCCCGCTGCACGAC    300

BSNT_01253___    301 GAGAATGGAAGAGTCATTGGAGGCGTCGGCCTCGGAACGAGCCTTGAGGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07360___yf    301 GAGAATGGAAGAGTCATTGGAGGCGTCGGCCTCGGAACGAGCCTTGAGGA    350

BSNT_01253___    351 GTCGTCAAAGCTGCATGATGTCGCGGAAAGCTTATCAGCTGTCGTTGAAC    400
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU07360___yf    351 GTCGTCAAAGCTGCATGATGTCGCGGAAAGCTTATCAGCTGTTGTTGAAC    400

BSNT_01253___    401 AAACAGCCGCGGCTATTTCCGACATTTCTGAATCAATTAACGGGTTTTCA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07360___yf    401 AAACAGCCGCGGCTATTTCCGACATTTCTGAATCAATTAACGGGTTTTCA    450

BSNT_01253___    451 ACTCAAATGTCGGGCATTTCCTCTCAGGCGAAAAAAGTAAGCGAAAGCGC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07360___yf    451 ACTCAAATGTCGGGCATTTCCTCTCAGGCGAAAAAAGTAAGCGAAAGCGC    500

BSNT_01253___    501 CGGTGAAATCGCCGATATTTCAGTAACTGTTAAAGGCATCTCTGACCAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU07360___yf    501 CGGTGAAATCGCCGATATTTCAGTAACTGTTAAAGGCATCTCGGACCAAA    550

BSNT_01253___    551 GCAATCTGCTCGGCTTGAATGCCGCGATCGAAGCGGCAAGAGCAGGGGAG    600
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU07360___yf    551 GCAATCTGCTCGGCTTGAACGCCGCGATCGAAGCGGCAAGAGCAGGGGAG    600

BSNT_01253___    601 TCCGGAAAAGGGTTCTCTGTCGTCGCAGATGAGATCAGAAAGCTAGCGAC    650
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU07360___yf    601 TCCGGAAAAGGATTCTCTGTCGTCGCAGATGAGATCAGAAAGCTAGCGAC    650

BSNT_01253___    651 GCATTCAAAAGAAAATGTCGGCCAAATTGACCAGATTACGAAAAAAATCC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07360___yf    651 GCATTCAAAAGAAAATGTCGGCCAAATTGACCAGATTACGAAAAAAATCC    700

BSNT_01253___    701 ACAGCCTGCTGAAAGGGCTGGAGGAATCCATTGAGTCGATTAACCAGCAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07360___yf    701 ACAGCCTGCTGAAAGGGCTGGAGGAATCCATTGAGTCGATTAACCAGCAT    750

BSNT_01253___    751 ACAGACGGACAAGCCGCTGCCGTTGAACAAATTTCCGCCACGATGCAGGA    800
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU07360___yf    751 ACAGACGGACAAGCCGCTGCTGTTGAACAAATTTCCGCCACGATGCAGGA    800

BSNT_01253___    801 GATTTCAGGAAGCGCGCAGCATCTTGCAAAAATGGCTGAAAAAGCGCTTG    850
                     |||||||||||||||||||||||||||.||||||||.|||||||||||||
BSU07360___yf    801 GATTTCAGGAAGCGCGCAGCATCTTGCGAAAATGGCCGAAAAAGCGCTTG    850

BSNT_01253___    851 AGGAAGAGTAA    861
                     |||||||||||
BSU07360___yf    851 AGGAAGAGTAA    861


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01253 and BSU07360

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
