Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_01243 and BSU07270

See Amino acid alignment / Visit BSNT_01243 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:57
# Commandline: needle
#    -asequence dna-align/BSNT_01243___yfnH.1.22522.seq
#    -bsequence dna-align/BSU07270___yfnH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01243___yfnH-BSU07270___yfnH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01243___yfnH-BSU07270___yfnH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01243___yfnH
# 2: BSU07270___yfnH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 765
# Identity:     755/765 (98.7%)
# Similarity:   755/765 (98.7%)
# Gaps:           0/765 ( 0.0%)
# Score: 3735.0
# 
#
#=======================================

BSNT_01243___      1 ATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACGAGAATGAGTGAAGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07270___yf      1 ATGAAAGCGGTCATTCTCTGCGGCGGAAAAGGAACGAGAATGAGTGAAGT     50

BSNT_01243___     51 CACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07270___yf     51 CACGAATGACATTCCTAAACCGCTCGCCATGATAGGCGGCAAACCGATTC    100

BSNT_01243___    101 TATGGCATATTATGAAAATTTATCAGTACTACGGAGTAAACGAGTTTATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07270___yf    101 TATGGCATATTATGAAAATTTATCAGTACTACGGAGTAAACGAGTTTATT    150

BSNT_01243___    151 CTGCTTTTGGGCTATAAAGGAGAAAAAATCAAGGAATACTTTCTCGACTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07270___yf    151 CTGCTTTTGGGCTATAAAGGAGAAAAAATCAAGGAATACTTTCTCGACTA    200

BSNT_01243___    201 TGAATGGAAGCACAACAGCCTGACACTCGACAGCTCTACGGGAGAGGTAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07270___yf    201 TGAATGGAAGCACAACAGCCTGACACTCGACAGCTCTACGGGAGAGGTAC    250

BSNT_01243___    251 AGATGCTGGGGCAGCCTGAAACGTGGAAAATTACGTTTTTGGAGACTGGG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07270___yf    251 AGATGCTGGGGCAGCCTGAAACGTGGAAAATTACGTTTTTGGAGACTGGG    300

BSNT_01243___    301 GAAGATACGCTGACAGCCGGAAGAATCTTGCAGGCGAAAGACTATATCGG    350
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU07270___yf    301 GTAGATACGCTGACAGCCGGAAGAATCTTGCAGGCGAAAGACTATATCGG    350

BSNT_01243___    351 TGATGAAACATTTCTGCTTACCTATGGGGACGGGCTGGCCAATATCAATC    400
                     ||||||||||||||||||.||||||||.||||||||||||||||||||||
BSU07270___yf    351 TGATGAAACATTTCTGCTCACCTATGGAGACGGGCTGGCCAATATCAATC    400

BSNT_01243___    401 TTTTCCATCTCATCAGCTATCATCAGACAAAAGGTGCTGCCGCGACTGTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07270___yf    401 TTTTCCATCTCATCAGCTATCATCAGACAAAAGGTGCTGCCGCGACTGTC    450

BSNT_01243___    451 ACCGGCATTGACAAAGTCTCGCAGTTTGGCACCTTGACGGTTGAGGACGG    500
                     ||||||||||||||||||||||||||||||||||||||.||||||||.||
BSU07270___yf    451 ACCGGCATTGACAAAGTCTCGCAGTTTGGCACCTTGACAGTTGAGGATGG    500

BSNT_01243___    501 CATGGCGAAAACATTTTCTGAGAAGACATCAAGTGACGGAATCATCAACG    550
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU07270___yf    501 CATGGCGAAAACATTTTCTGAGAAGACATCAAGTGATGGAATCATCAACG    550

BSNT_01243___    551 GCGGATTCTTCGTTCTCAGTCCAAAGGTTTTCGATTATTTGCCGAAGGAC    600
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU07270___yf    551 GCGGATTCTTCGTTCTTAGTCCAAAGGTTTTCGATTATTTGCCGAAGGAC    600

BSNT_01243___    601 GGAAACACGATGTTCGAAGATGAACCGCTGAAGAACCTTGCCAAAGACGG    650
                     ||.||||||||||||||||||||||||||||||||||||||||||||.||
BSU07270___yf    601 GGGAACACGATGTTCGAAGATGAACCGCTGAAGAACCTTGCCAAAGATGG    650

BSNT_01243___    651 GGAGCTTGCTGTGTACCGCCATTACGGATTTTGGACGGCCATTGATACGT    700
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU07270___yf    651 GGAGCTTGCTGTGTACCGCCATTACGGATTTTGGACGGCCATCGATACGT    700

BSNT_01243___    701 ATAAAAATCTCTTAGAAGTCAACAAAATGTGGAATCAAGGACAACAAGTA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07270___yf    701 ATAAAAATCTCTTAGAAGTCAACAAAATGTGGAATCAAGGACAACAAGTA    750

BSNT_01243___    751 TGGAAGGTATGGTGA    765
                     |||||||||||||||
BSU07270___yf    751 TGGAAGGTATGGTGA    765


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.