Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01235 and BSU07240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:55
# Commandline: needle
# -asequence dna-align/BSNT_01235___yetN.1.22522.seq
# -bsequence dna-align/BSU07240___yetN.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01235___yetN-BSU07240___yetN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01235___yetN-BSU07240___yetN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01235___yetN
# 2: BSU07240___yetN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1074
# Identity: 1051/1074 (97.9%)
# Similarity: 1051/1074 (97.9%)
# Gaps: 3/1074 ( 0.3%)
# Score: 5164.0
#
#
#=======================================
BSNT_01235___ 1 ATGGATTTTGAAATTCGGTTTTTATCCTTTTATGTCATACAGGTGGAAGG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07240___ye 1 ATGGATTTTGAAATTCGGTTTTTATCCTTTTATGTCATACAGGTGGAAGG 50
BSNT_01235___ 51 CAAAGATGAGCAGGCGAACAAGCAGTTCAAGCACTTCCAGACCCTTGATA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07240___ye 51 CAAAGATGAGCAGGCGAACAAGCAGTTCAAGCACTTCCAGACCCTTGATA 100
BSNT_01235___ 101 CGGGCGAATTTGAAGAAAGCGAGCTGAAGGACTTTCTCGACGGGGAACTG 150
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU07240___ye 101 CGGGAGAATTTGAAGAAAGCGAGCTGAAGGACTTTCTCGACGGGGAACTG 150
BSNT_01235___ 151 AAAAAAATCGTCAAACGGAAAGCCGACCGCCATCCGCAGTCCGAGCAGGT 200
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU07240___ye 151 AAAAAAATCGTTAAACGGAAAGCCGACCGCCATCCGCAGTCCGAGCAGGT 200
BSNT_01235___ 201 CCCGACGAAAATCGGCCATTTTATCGTCGAGCCCGGCCACGAGCTCGATT 250
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU07240___ye 201 GCCGACGAAAATCGGCCATTTTATCGTCGAGCCCGGCCACGAGCTCGATT 250
BSNT_01235___ 251 CCAACCCAAACTACAACATGTTCAACCGCGCGCGTCTGGCGGAAACAAAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07240___ye 251 CCAACCCAAACTACAACATGTTCAACCGCGCGCGTCTGGCGGAAACAAAA 300
BSNT_01235___ 301 GAAGACTTCAATGAGCTGAGTGAGCAGTTCGTCCGCACGTACCTCGACAC 350
||||||||||||||||||||.|||||||||||||||||||||||.|||||
BSU07240___ye 301 GAAGACTTCAATGAGCTGAGCGAGCAGTTCGTCCGCACGTACCTTGACAC 350
BSNT_01235___ 351 AAGCGCGGTTCGCGGCGGCGTGTTTCTCGTCGCTTCGGCCGTGCCGAGAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07240___ye 351 AAGCGCGGTTCGCGGCGGCGTGTTTCTCGTCGCTTCGGCCGTGCCGAGAA 400
BSNT_01235___ 401 AATACTTTGACGAGTCATTTGTCTTCATTATGAAATGTGATTTTGAGCCG 450
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU07240___ye 401 AATACTTTGATGAGTCATTTGTCTTCATTATGAAATGTGATTTTGAGCCG 450
BSNT_01235___ 451 AAGGTCGCCCGCATCTCTGACGCGTCTTCTCTCATTAAAAAAGTCGAAAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07240___ye 451 AAGGTCGCCCGCATCTCTGACGCGTCTTCTCTCATTAAAAAAGTCGAAAT 500
BSNT_01235___ 501 GGCGATCACGACAAAAAACATGAAAAGCATCCAATACCCGTACATGCCAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07240___ye 501 GGCGATCACGACAAAAAACATGAAAAGCATCCAATACCCGTACATGCCAG 550
BSNT_01235___ 551 AGGAAGGAATGGTCGAGGAAGGTGAGCTGAAAATCCACCAGGCTTCGCAC 600
|||||||||||||||||||||||||.|||||||||||||||||.||||||
BSU07240___ye 551 AGGAAGGAATGGTCGAGGAAGGTGAACTGAAAATCCACCAGGCCTCGCAC 600
BSNT_01235___ 601 GCCCGCTATTTTGAGGACTTTCTGAAATTCGTCGAGTACGGAGAATCGAT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07240___ye 601 GCCCGCTATTTTGAGGACTTTCTGAAATTCGTCGAGTACGGAGAATCGAT 650
BSNT_01235___ 651 GCCGGAAATCATGAAAAATCAGGTCATGAACATGGTACAGGAGCACGTCT 700
|||.|||||||||||||||||||||||||||||||||||.||||||||||
BSU07240___ye 651 GCCAGAAATCATGAAAAATCAGGTCATGAACATGGTACAAGAGCACGTCT 700
BSNT_01235___ 701 ACGAGACATTTGAAGACAACAGCGAAGAGCTCAAGCAGTTCGAGCACGAC 750
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU07240___ye 701 ACGAGACATTTGAAGACAACAGCGAAGAACTCAAGCAGTTCGAGCACGAC 750
BSNT_01235___ 751 ATTGAGATTTGGGAAGCAAGCGAAAAACGGGAAATCCAAGAGCGCCTCGA 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07240___ye 751 ATTGAGATTTGGGAAGCAAGCGAAAAACGGGAAATCCAAGAGCGCCTCGA 800
BSNT_01235___ 801 CACCCATCAAGTCATCGAAGCCTCCGCCCAAATCATCGAGCACACGCCAG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07240___ye 801 CACCCATCAAGTCATCGAAGCCTCCGCCCAAATCATCGAGCACACGCCAG 850
BSNT_01235___ 851 AGGCCCAGCTGAAAATGAAAGTCGGAGAAACAGAGATTAAGGGATTGCTA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07240___ye 851 AGGCCCAGCTGAAAATGAAAGTCGGAGAAACAGAGATTAAGGGATTGCTA 900
BSNT_01235___ 901 GCGGATTTTGGCGATTCTATTCATCTCGCAAAAGTAAACGGGCGCTATGT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07240___ye 901 GCGGATTTTGGCGATTCTATTCATCTCGCAAAAGTAAACGGGCGCTATGT 950
BSNT_01235___ 951 CGCGCTGATTGAAGCCGAGACGATTTCGTTTGAGAAAGGCAGTTCGCCGG 1000
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU07240___ye 951 CGCGCTGATTGAAGCCGAGACGATTTCGTTTGAGAAAGGCAGTTCACCGG 1000
BSNT_01235___ 1001 TGGAGTTTTATAAGCCTGAGGGGCTGCATGAGGTGATTGAGCGGATAAAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||
BSU07240___ye 1001 TGGAGTTTTATAAGCCTGAGGGGCTGCATGAGGTGATTGAGCGGATAA-- 1048
BSNT_01235___ 1051 GGGAAAAATATAAATGACGATTAA 1074
||||.||.|.|.|..|.||.|||
BSU07240___ye 1049 -GGAATAAAACAGAGCAAGACTAA 1071
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