Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01229 and BSU07190

See Amino acid alignment / Visit BSNT_01229 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:55
# Commandline: needle
#    -asequence dna-align/BSNT_01229___yezD.1.22522.seq
#    -bsequence dna-align/BSU07190___yezD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01229___yezD-BSU07190___yezD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01229___yezD-BSU07190___yezD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01229___yezD
# 2: BSU07190___yezD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     166/168 (98.8%)
# Similarity:   166/168 (98.8%)
# Gaps:           0/168 ( 0.0%)
# Score: 822.0
# 
#
#=======================================

BSNT_01229___      1 TTGGTTTCAAAATCAACGATTGATCCGGAAGTGATTGAAAAAATCATCAG     50
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU07190___ye      1 TTGGTTTCTAAATCAACGATTGATCCGGAAGTGATTGAAAAAATCATCAG     50

BSNT_01229___     51 CTCGCTGGAAACACTCGATTTCGGCACCGTTCAGATTACGGTTCATGATT    100
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU07190___ye     51 CTCGCTGGAAACACTCGATTTCGGCACGGTTCAGATTACGGTTCATGATT    100

BSNT_01229___    101 CTCAGATTACCCAAATTGAGAAAATAGAAAAGCACCGTTTTTCGCTGAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07190___ye    101 CTCAGATTACCCAAATTGAGAAAATAGAAAAGCACCGTTTTTCGCTGAAA    150

BSNT_01229___    151 AGGAAAGAATCAAAATGA    168
                     ||||||||||||||||||
BSU07190___ye    151 AGGAAAGAATCAAAATGA    168


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