Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01212 and BSU07090

See Amino acid alignment / Visit BSNT_01212 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:54
# Commandline: needle
#    -asequence dna-align/BSNT_01212.1.22522.seq
#    -bsequence dna-align/BSU07090___yetA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01212-BSU07090___yetA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01212-BSU07090___yetA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01212
# 2: BSU07090___yetA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2578
# Identity:     873/2578 (33.9%)
# Similarity:   873/2578 (33.9%)
# Gaps:        1676/2578 (65.0%)
# Score: 4197.5
# 
#
#=======================================

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye      1 ATGAAAAAGATCAAATGGTTATCAGGACAGCCAAAGGTGACAAGCGGCGT     50

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye     51 GACGTGGGGCATGCCATGGAAAAAAGGAGAATTAAAAAAAGGAGACCGTC    100

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    101 TGGCGCTTATGAATGAAAACGCGGAAACGCGATATGTGCAAAGCGAACCG    150

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    151 TCGGCCTATTGGCCGGACGGGAGCATCAAGTGGACGAAGCACGCGGCGGT    200

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    201 GTTTGGCGGTCAGGAAAACCAAAGCTTTACAGTGCACAAAAGAGAAGTGC    250

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    251 CGCAGCCAACTGAATCGCTCAGCATTCTTGAGACAGAGCATGATATCCAA    300

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    301 GTGGATACAGGAGCACTCGTTTGTACCATTCATAAAACAGGATCTGATTT    350

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    351 CATTCAATCATTGCAGATCAATGGAAAGCCGATCGCCGCAGGCGGGAGGC    400

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    401 TCGTTGCGATAAGAGAAACGAGAAAAGAGTCAGCGGCGAAAATGGTTCTT    450

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    451 TTGCATGAAAGGTCTGTCAGCTTTATCAAACGGGCGGCGATTGAGCAGAG    500

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    501 TGGTCCTGTCAAAGCAGTAGTCAAAATCGAGGGAGTGCATGTGCTTCATA    550

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    551 AAACGTATGAGGAATGGCTGCCGTTTGTCATCCGATTAACGTTTTATGCC    600

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    601 GGGCTGTCTGAGATCGGCCTTGTGCACACGCAGCTGATTGACAGGAGCGG    650

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    651 TAAACTAGAATTCGTTAAGGGGCTCGGCATCGAATTCGACCTTTTTTTGG    700

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    701 AGGGAGAGCCGTACAACCGCCATTTCCGCTTTGCGGGAGAGAAAGGGATG    750

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    751 TATAAAGAACCCGCCCAGCTGTTTGGCACACGTAAATTCAATGAACGATA    800

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    801 TCCGCTTTATGAAAAACAAATCAATGGCGAAATGCTGTCTCCAGATGAAG    850

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    851 AGCATAAGGAATGGTTTGCACATGGCACACAGAATGCGGTTTGGGACGAT    900

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    901 GTCAAGATCGTGCAAGATTCCAGCGATCATTACAGCCTGTCAAAACGGAC    950

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye    951 CGGAAAAGATTATGCGTGGGTTGGAATGCTGCATGGCAGCCGGGCGAAGG   1000

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye   1001 GGCTCTGCTATGCGGGCGGAAAAAATGGCGGTGTGGCTCTCGGCCTGCGG   1050

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye   1051 TATTTCTTTGAGAAATATCCTTCAGCACTGGAAATCACAGGTCTTGCCGG   1100

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye   1101 CAGCCGCCCCAAAATGACTATCTGGCTTTGGCCTCCGGACGGCGAAGCGA   1150

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye   1151 TGGATTTGCGGCATTATACAGGAAACACTCACGTGGCCAGCGCGTATGAA   1200

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye   1201 GGCTTTGATGAAATGCGCTCTGATCCGACAGGCATTGCGAACACAAATGA   1250

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye   1251 AATAAGCCTGGCGTGCTTTTCGCACATGCCGTCTGACGAAGTCCTCAATG   1300

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye   1301 CGCTGGCTGACAAATGGCAGGCGCCCCCGCTCATTGTATGCGAGCCGGAC   1350

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye   1351 GTCTATTACGAATCAAAAGCACTCGGGGTATGGAGCATCATTGACACATC   1400

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye   1401 CCATCCGCTCAAAAAAGAGCTGGAAGAACAGCTTGATGCGGCCTTTCTGT   1450

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye   1451 TTTATAAAAAGGAAGTAGAGCAACGCAGATGGTACGGTTTTTGGCATTAT   1500

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye   1501 GGCGATGTCATGCATACGTATGACCCGATCCGGCATATGTGGCGGTACGA   1550

BSNT_01212         0 --------------------------------------------------      0
                                                                       
BSU07090___ye   1551 TCTCGGCGGATACGCATGGCAAAACAATGAGCTCGTTCCGACCCTATGGC   1600

BSNT_01212         1 --------------------------------------------ATGGCA      6
                                                                 ||||||
BSU07090___ye   1601 TGTGGCAGGCGTTTTTCCGCTCAGGCAGAGAGGATATCTTCCGAATGGCA   1650

BSNT_01212         7 GAAGCCATGACCCGCCATACGAGCGAAACGGACAGCTTTCACCTCGGTGA     56
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU07090___ye   1651 GAAGCCATGACCCGCCATACGAGTGAAACGGACAGCTTTCACCTCGGTGA   1700

BSNT_01212        57 ATACGCAGGACTTGGTTCACGGCATAACGTTGTGCACTGGGGGTGCGGCT    106
                     |||.||.||.|||||.|||||||||||.||||||||||||||.|||||||
BSU07090___ye   1701 ATATGCCGGGCTTGGCTCACGGCATAATGTTGTGCACTGGGGATGCGGCT   1750

BSNT_01212       107 GCAAGGAAGCGAGAATCAGCATGGCCGGGCTTTATAAATTCTATTATTAT    156
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU07090___ye   1751 GCAAGGAAGCGAGAATCAGCATGGCCGGGCTTCATAAATTCTATTATTAT   1800

BSNT_01212       157 CTGACGGGTGATGAGCGGACGGGAGATCTTTTGACAGAGGTGAAGGATGC    206
                     ||||||||||||||.|||||||||||||||||||||||.|||||||||||
BSU07090___ye   1801 CTGACGGGTGATGACCGGACGGGAGATCTTTTGACAGAAGTGAAGGATGC   1850

BSNT_01212       207 CGATTATGCCCTCGTCAAAACCGATCCGATGCGCGCTTTTTACGAGAAAG    256
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU07090___ye   1851 CGATTATGCCCTTGTCAAAACCGATCCGATGCGCGCTTTTTACGAGAAAG   1900

BSNT_01212       257 GCAAGCACCCGACTCACGCCAGAACGGGACCGGACTGGGCGGCGTTTTGC    306
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07090___ye   1901 GCAAGCACCCGACTCACGCCAGAACGGGACCGGACTGGGCGGCGTTTTGC   1950

BSNT_01212       307 TCGAACTGGCTGGCGGAATGGGAGCGGACCGAAAATCCGGAATATCTCAA    356
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU07090___ye   1951 TCGAACTGGCTGGCGGAATGGGAGCGGACCGAAAATTCGGAATATCTCAA   2000

BSNT_01212       357 AAAAATCGAAACGGGAATCAACTGTCTGAAGTGGCTACCGCTCCGCTTAT    406
                     |||||||||||||||||||||||||||||||.||||.|||||||||||||
BSU07090___ye   2001 AAAAATCGAAACGGGAATCAACTGTCTGAAGCGGCTGCCGCTCCGCTTAT   2050

BSNT_01212       407 TATCCGGCCCGACATTTGAATATGACCCGGCGACCTCGATGCTTCATCAC    456
                     ||||.||||||||||||||||||||.|||||||||||||||||||||||.
BSU07090___ye   2051 TATCTGGCCCGACATTTGAATATGATCCGGCGACCTCGATGCTTCATCAT   2100

BSNT_01212       457 ATGGGAGACGGCATTGCGGGCGGATATCATATGATCATTGCCTTCGGCGC    506
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07090___ye   2101 ATGGGAGACGGCATTGCGGGCGGATATCATATGATCATTGCCTTCGGCGC   2150

BSNT_01212       507 GCCGCAAGTGTGGATGGAGCTGGCTGAGCTGCTTGATGACCGGGAATGGG    556
                     ||||||||||||||||||||||||||||||.|||||||||.|||||||||
BSU07090___ye   2151 GCCGCAAGTGTGGATGGAGCTGGCTGAGCTTCTTGATGACTGGGAATGGG   2200

BSNT_01212       557 AGGATATGCTGAGTAAATTCGGCGAATTTTACACACTCAGTGATGAGGAA    606
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU07090___ye   2201 AGGATATGCTGAGTGAATTCGGCGAATTTTACACACTCAGTGATGAGGAA   2250

BSNT_01212       607 AAACGGAAAAAAAGCGGAGGCGCTCTTCATGACAGGCATTTTCACTGGCC    656
                     |||||.|||||||||||||||||||||||||||.||||||||||||||||
BSU07090___ye   2251 AAACGAAAAAAAAGCGGAGGCGCTCTTCATGACGGGCATTTTCACTGGCC   2300

BSNT_01212       657 GATGTTCGCCGCCGGTATGACAGCCTACGCCGCGAGAAAAAAACAAGATC    706
                     |||||||||||||||||||||||||||||||||.||||||||.|||||||
BSU07090___ye   2301 GATGTTCGCCGCCGGTATGACAGCCTACGCCGCAAGAAAAAAGCAAGATC   2350

BSNT_01212       707 CTCATCTCGCCGCCAAAGCGTGGAATCTTTTGCTAGATGATAAGCTCAGC    756
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU07090___ye   2351 CTCATCTCGCCGCCAAAGCGTGGAATCTTTTGCTAGAAGATAAGCTCAGC   2400

BSNT_01212       757 CATACGCCGCTTCCGATCAAACCGGAGCGCATCGAGACATGGACGCAGCT    806
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07090___ye   2401 CATACGCCGCTTCCGATCAAACCGGAGCGCATCGAGACATGGACGCAGCT   2450

BSNT_01212       807 AGAGGAGCTTCCATGGGTGACAACGAACACTGTCTCTCAATGGTGTTTAA    856
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07090___ye   2451 AGAGGAGCTTCCATGGGTGACAACGAACACTGTCTCTCAATGGTGTTTAA   2500

BSNT_01212       857 ATGTCATAGCGGCGCTGGAACTGATCCG-GAT------------------    887
                     ||||||||||||||||||||||||||.| |||                  
BSU07090___ye   2501 ATGTCATAGCGGCGCTGGAACTGATCGGAGATTCCCTTCCGGCAAAAAAA   2550

BSNT_01212       888 --AACAGCCGG--AATTTCATAG-----    906
                       ||||.|.||  ||    |.||     
BSU07090___ye   2551 GAAACATCGGGCAAA----AAAGGATAA   2574


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