Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01212 and BSU07090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:54
# Commandline: needle
# -asequence dna-align/BSNT_01212.1.22522.seq
# -bsequence dna-align/BSU07090___yetA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01212-BSU07090___yetA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01212-BSU07090___yetA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01212
# 2: BSU07090___yetA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2578
# Identity: 873/2578 (33.9%)
# Similarity: 873/2578 (33.9%)
# Gaps: 1676/2578 (65.0%)
# Score: 4197.5
#
#
#=======================================
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 1 ATGAAAAAGATCAAATGGTTATCAGGACAGCCAAAGGTGACAAGCGGCGT 50
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 51 GACGTGGGGCATGCCATGGAAAAAAGGAGAATTAAAAAAAGGAGACCGTC 100
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 101 TGGCGCTTATGAATGAAAACGCGGAAACGCGATATGTGCAAAGCGAACCG 150
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 151 TCGGCCTATTGGCCGGACGGGAGCATCAAGTGGACGAAGCACGCGGCGGT 200
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 201 GTTTGGCGGTCAGGAAAACCAAAGCTTTACAGTGCACAAAAGAGAAGTGC 250
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 251 CGCAGCCAACTGAATCGCTCAGCATTCTTGAGACAGAGCATGATATCCAA 300
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 301 GTGGATACAGGAGCACTCGTTTGTACCATTCATAAAACAGGATCTGATTT 350
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 351 CATTCAATCATTGCAGATCAATGGAAAGCCGATCGCCGCAGGCGGGAGGC 400
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 401 TCGTTGCGATAAGAGAAACGAGAAAAGAGTCAGCGGCGAAAATGGTTCTT 450
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 451 TTGCATGAAAGGTCTGTCAGCTTTATCAAACGGGCGGCGATTGAGCAGAG 500
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 501 TGGTCCTGTCAAAGCAGTAGTCAAAATCGAGGGAGTGCATGTGCTTCATA 550
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 551 AAACGTATGAGGAATGGCTGCCGTTTGTCATCCGATTAACGTTTTATGCC 600
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 601 GGGCTGTCTGAGATCGGCCTTGTGCACACGCAGCTGATTGACAGGAGCGG 650
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 651 TAAACTAGAATTCGTTAAGGGGCTCGGCATCGAATTCGACCTTTTTTTGG 700
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 701 AGGGAGAGCCGTACAACCGCCATTTCCGCTTTGCGGGAGAGAAAGGGATG 750
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 751 TATAAAGAACCCGCCCAGCTGTTTGGCACACGTAAATTCAATGAACGATA 800
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 801 TCCGCTTTATGAAAAACAAATCAATGGCGAAATGCTGTCTCCAGATGAAG 850
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 851 AGCATAAGGAATGGTTTGCACATGGCACACAGAATGCGGTTTGGGACGAT 900
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 901 GTCAAGATCGTGCAAGATTCCAGCGATCATTACAGCCTGTCAAAACGGAC 950
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 951 CGGAAAAGATTATGCGTGGGTTGGAATGCTGCATGGCAGCCGGGCGAAGG 1000
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 1001 GGCTCTGCTATGCGGGCGGAAAAAATGGCGGTGTGGCTCTCGGCCTGCGG 1050
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 1051 TATTTCTTTGAGAAATATCCTTCAGCACTGGAAATCACAGGTCTTGCCGG 1100
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 1101 CAGCCGCCCCAAAATGACTATCTGGCTTTGGCCTCCGGACGGCGAAGCGA 1150
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 1151 TGGATTTGCGGCATTATACAGGAAACACTCACGTGGCCAGCGCGTATGAA 1200
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 1201 GGCTTTGATGAAATGCGCTCTGATCCGACAGGCATTGCGAACACAAATGA 1250
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 1251 AATAAGCCTGGCGTGCTTTTCGCACATGCCGTCTGACGAAGTCCTCAATG 1300
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 1301 CGCTGGCTGACAAATGGCAGGCGCCCCCGCTCATTGTATGCGAGCCGGAC 1350
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 1351 GTCTATTACGAATCAAAAGCACTCGGGGTATGGAGCATCATTGACACATC 1400
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 1401 CCATCCGCTCAAAAAAGAGCTGGAAGAACAGCTTGATGCGGCCTTTCTGT 1450
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 1451 TTTATAAAAAGGAAGTAGAGCAACGCAGATGGTACGGTTTTTGGCATTAT 1500
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 1501 GGCGATGTCATGCATACGTATGACCCGATCCGGCATATGTGGCGGTACGA 1550
BSNT_01212 0 -------------------------------------------------- 0
BSU07090___ye 1551 TCTCGGCGGATACGCATGGCAAAACAATGAGCTCGTTCCGACCCTATGGC 1600
BSNT_01212 1 --------------------------------------------ATGGCA 6
||||||
BSU07090___ye 1601 TGTGGCAGGCGTTTTTCCGCTCAGGCAGAGAGGATATCTTCCGAATGGCA 1650
BSNT_01212 7 GAAGCCATGACCCGCCATACGAGCGAAACGGACAGCTTTCACCTCGGTGA 56
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU07090___ye 1651 GAAGCCATGACCCGCCATACGAGTGAAACGGACAGCTTTCACCTCGGTGA 1700
BSNT_01212 57 ATACGCAGGACTTGGTTCACGGCATAACGTTGTGCACTGGGGGTGCGGCT 106
|||.||.||.|||||.|||||||||||.||||||||||||||.|||||||
BSU07090___ye 1701 ATATGCCGGGCTTGGCTCACGGCATAATGTTGTGCACTGGGGATGCGGCT 1750
BSNT_01212 107 GCAAGGAAGCGAGAATCAGCATGGCCGGGCTTTATAAATTCTATTATTAT 156
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU07090___ye 1751 GCAAGGAAGCGAGAATCAGCATGGCCGGGCTTCATAAATTCTATTATTAT 1800
BSNT_01212 157 CTGACGGGTGATGAGCGGACGGGAGATCTTTTGACAGAGGTGAAGGATGC 206
||||||||||||||.|||||||||||||||||||||||.|||||||||||
BSU07090___ye 1801 CTGACGGGTGATGACCGGACGGGAGATCTTTTGACAGAAGTGAAGGATGC 1850
BSNT_01212 207 CGATTATGCCCTCGTCAAAACCGATCCGATGCGCGCTTTTTACGAGAAAG 256
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU07090___ye 1851 CGATTATGCCCTTGTCAAAACCGATCCGATGCGCGCTTTTTACGAGAAAG 1900
BSNT_01212 257 GCAAGCACCCGACTCACGCCAGAACGGGACCGGACTGGGCGGCGTTTTGC 306
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07090___ye 1901 GCAAGCACCCGACTCACGCCAGAACGGGACCGGACTGGGCGGCGTTTTGC 1950
BSNT_01212 307 TCGAACTGGCTGGCGGAATGGGAGCGGACCGAAAATCCGGAATATCTCAA 356
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU07090___ye 1951 TCGAACTGGCTGGCGGAATGGGAGCGGACCGAAAATTCGGAATATCTCAA 2000
BSNT_01212 357 AAAAATCGAAACGGGAATCAACTGTCTGAAGTGGCTACCGCTCCGCTTAT 406
|||||||||||||||||||||||||||||||.||||.|||||||||||||
BSU07090___ye 2001 AAAAATCGAAACGGGAATCAACTGTCTGAAGCGGCTGCCGCTCCGCTTAT 2050
BSNT_01212 407 TATCCGGCCCGACATTTGAATATGACCCGGCGACCTCGATGCTTCATCAC 456
||||.||||||||||||||||||||.|||||||||||||||||||||||.
BSU07090___ye 2051 TATCTGGCCCGACATTTGAATATGATCCGGCGACCTCGATGCTTCATCAT 2100
BSNT_01212 457 ATGGGAGACGGCATTGCGGGCGGATATCATATGATCATTGCCTTCGGCGC 506
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07090___ye 2101 ATGGGAGACGGCATTGCGGGCGGATATCATATGATCATTGCCTTCGGCGC 2150
BSNT_01212 507 GCCGCAAGTGTGGATGGAGCTGGCTGAGCTGCTTGATGACCGGGAATGGG 556
||||||||||||||||||||||||||||||.|||||||||.|||||||||
BSU07090___ye 2151 GCCGCAAGTGTGGATGGAGCTGGCTGAGCTTCTTGATGACTGGGAATGGG 2200
BSNT_01212 557 AGGATATGCTGAGTAAATTCGGCGAATTTTACACACTCAGTGATGAGGAA 606
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU07090___ye 2201 AGGATATGCTGAGTGAATTCGGCGAATTTTACACACTCAGTGATGAGGAA 2250
BSNT_01212 607 AAACGGAAAAAAAGCGGAGGCGCTCTTCATGACAGGCATTTTCACTGGCC 656
|||||.|||||||||||||||||||||||||||.||||||||||||||||
BSU07090___ye 2251 AAACGAAAAAAAAGCGGAGGCGCTCTTCATGACGGGCATTTTCACTGGCC 2300
BSNT_01212 657 GATGTTCGCCGCCGGTATGACAGCCTACGCCGCGAGAAAAAAACAAGATC 706
|||||||||||||||||||||||||||||||||.||||||||.|||||||
BSU07090___ye 2301 GATGTTCGCCGCCGGTATGACAGCCTACGCCGCAAGAAAAAAGCAAGATC 2350
BSNT_01212 707 CTCATCTCGCCGCCAAAGCGTGGAATCTTTTGCTAGATGATAAGCTCAGC 756
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU07090___ye 2351 CTCATCTCGCCGCCAAAGCGTGGAATCTTTTGCTAGAAGATAAGCTCAGC 2400
BSNT_01212 757 CATACGCCGCTTCCGATCAAACCGGAGCGCATCGAGACATGGACGCAGCT 806
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07090___ye 2401 CATACGCCGCTTCCGATCAAACCGGAGCGCATCGAGACATGGACGCAGCT 2450
BSNT_01212 807 AGAGGAGCTTCCATGGGTGACAACGAACACTGTCTCTCAATGGTGTTTAA 856
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07090___ye 2451 AGAGGAGCTTCCATGGGTGACAACGAACACTGTCTCTCAATGGTGTTTAA 2500
BSNT_01212 857 ATGTCATAGCGGCGCTGGAACTGATCCG-GAT------------------ 887
||||||||||||||||||||||||||.| |||
BSU07090___ye 2501 ATGTCATAGCGGCGCTGGAACTGATCGGAGATTCCCTTCCGGCAAAAAAA 2550
BSNT_01212 888 --AACAGCCGG--AATTTCATAG----- 906
||||.|.|| || |.||
BSU07090___ye 2551 GAAACATCGGGCAAA----AAAGGATAA 2574
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