Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01189 and BSU07000

See Amino acid alignment / Visit BSNT_01189 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:51
# Commandline: needle
#    -asequence dna-align/BSNT_01189___yesR.1.22522.seq
#    -bsequence dna-align/BSU07000___yesR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01189___yesR-BSU07000___yesR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01189___yesR-BSU07000___yesR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01189___yesR
# 2: BSU07000___yesR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1035
# Identity:    1023/1035 (98.8%)
# Similarity:  1023/1035 (98.8%)
# Gaps:           0/1035 ( 0.0%)
# Score: 5067.0
# 
#
#=======================================

BSNT_01189___      1 ATGGCACAGCTTATCTTTGATGAAGAAAAGGTGACGTCGGTTATTGACCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07000___ye      1 ATGGCACAGCTTATCTTTGATGAAGAAAAGGTGACGTCGGTTATTGACCG     50

BSNT_01189___     51 GATCGTGAAACGGACATTTCAGATGGATTTTGCGTGGGATTGGCCGGGCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07000___ye     51 GATCGTGAAACGGACATTTCAGATGGATTTTGCGTGGGATTGGCCGGGCG    100

BSNT_01189___    101 GCGTCGCGTTTTACGGTGTGGCGGAGGCCTATGAAGCGACGGAAAACGAG    150
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU07000___ye    101 GCGTTGCGTTTTACGGTGTGGCGGAGGCCTATGAAGCGACGGAAAACGAG    150

BSNT_01189___    151 GAATATATCAATCTGTTAAAAACGTGGGTGGATGAACAGCTGGAGGATGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07000___ye    151 GAATATATCAATCTGTTAAAAACGTGGGTGGATGAACAGCTGGAGGATGG    200

BSNT_01189___    201 GCTGCCGCCGCTTTCGATCAACGGAGTTTCCATTGGGCATACGCTTTTGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07000___ye    201 GCTGCCGCCGCTTTCGATCAACGGAGTTTCCATTGGGCATACGCTTTTGT    250

BSNT_01189___    251 TCCTCCACAAGGTGACAGGTGATGACGTGTATTTGGAAACAGCGGCCGAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07000___ye    251 TCCTCCACAAGGTGACAGGTGATGACGTGTATTTGGAAACAGCGGCCGAG    300

BSNT_01189___    301 ATGGCGGAATATGTGCTGCATAAGGCGCCGCGCTTTGGCGAGGGTATCCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07000___ye    301 ATGGCGGAATATGTGCTGCATAAGGCGCCGCGCTTTGGCGAGGGTATCCT    350

BSNT_01189___    351 TCAGCATACGGTGAATGCGGCAGAATACGTGTTTCCTGAGCAGGCATGGG    400
                     ||||||||||||||||||||||||||||||.||.|||||.||||||||||
BSU07000___ye    351 TCAGCATACGGTGAATGCGGCAGAATACGTATTCCCTGAACAGGCATGGG    400

BSNT_01189___    401 CGGATACGCTGATGATGGCTGGGCTGTTTATGCTGAGAATCGGGCGGATC    450
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU07000___ye    401 CGGATACGCTGATGATGGCTGGGCTGTTTATGCTGAGAATCGGGCGGGTC    450

BSNT_01189___    451 ATGGAGCGTGAGGATTATTTTGAAGACGGCCTGCGCCAGTTTCACGGACA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07000___ye    451 ATGGAGCGTGAGGATTATTTTGAAGACGGCCTGCGCCAGTTTCACGGACA    500

BSNT_01189___    501 TGAGGACGTGCTTCAGGACCCTGTCACGAATTTGTACTACCACGCCTGGG    550
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU07000___ye    501 TGAGGATGTGCTTCAGGACCCTGTCACGAATTTGTACTACCACGCCTGGG    550

BSNT_01189___    551 ACAACAAAGCGCAAAATCATCTGTCGGGGATTTATTGGGGCAGGGCGAAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07000___ye    551 ACAACAAAGCGCAAAATCATCTGTCGGGGATTTATTGGGGCAGGGCGAAC    600

BSNT_01189___    601 GGCTGGGCGGCACTCACGATGGCAAAGGCGCTCCCCCTTATTGAGGTGAC    650
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU07000___ye    601 GGCTGGGCGGCACTCACGATGGCAAAGGCGCTCCCGCTTATTGAGGTGAC    650

BSNT_01189___    651 ACATCCTTCCTTTATGATCATCGACGGATCGCTCAGAGACCAGCTGAGCG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07000___ye    651 ACATCCTTCCTTTATGATCATCGACGGATCGCTCAGAGACCAGCTGAGCG    700

BSNT_01189___    701 CGCTTGTCCGGCTTCAGGATGAATCAGGGCTGTGGCATACGATTTTGGAT    750
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU07000___ye    701 CGCTTGTCCGGCTTCAGGATGAATCAGGGCTGTGGCATACAATTTTGGAT    750

BSNT_01189___    751 GATCCGGATTCTTATCTGGAGGTTTCGGCATCAGCCGGTATTGCTTCTGC    800
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU07000___ye    751 GATCCGGATTCTTATCTGGAGGTTTCGGCATCAGCGGGTATTGCTTCTGC    800

BSNT_01189___    801 TCTGATGTCGAGCGGAAAGCTGTATACAAAATATGTGCAGAAATCGCTTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07000___ye    801 TCTGATGTCGAGCGGAAAGCTGTATACAAAATATGTGCAGAAATCGCTTG    850

BSNT_01189___    851 CCGCCATTTTGGATGCGGTGGAAGAGGACGGACGGGTCAGCAAGGTATCG    900
                     ||||||||||||||||.|||||||||||||||||||||||||.|||||||
BSU07000___ye    851 CCGCCATTTTGGATGCAGTGGAAGAGGACGGACGGGTCAGCAGGGTATCG    900

BSNT_01189___    901 GCCGGGACAGCCGTCATGAAAAATGCCGAAGGATACAAACAGGTGCCTTA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07000___ye    901 GCCGGGACAGCCGTCATGAAAAATGCCGAAGGATACAAACAGGTGCCTTA    950

BSNT_01189___    951 CAAACGAATACAAGGATGGGGGCAGGGACTTGCGCTGACGTTTCTTGCTG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU07000___ye    951 CAAACGAATACAAGGATGGGGGCAGGGACTTGCGCTGACGTTTCTTGCTG   1000

BSNT_01189___   1001 ATGTTTTGAAAACGAAAAAACGCGTGTATCAGTAA   1035
                     |||||||||||||||||||||||.|||||||||||
BSU07000___ye   1001 ATGTTTTGAAAACGAAAAAACGCTTGTATCAGTAA   1035


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_01189 and BSU07000

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
