Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01179 and BSU06940
See
Amino acid alignment /
Visit
BSNT_01179 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:50
# Commandline: needle
# -asequence dna-align/BSNT_01179___yesL.1.22522.seq
# -bsequence dna-align/BSU06940___yesL.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01179___yesL-BSU06940___yesL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01179___yesL-BSU06940___yesL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01179___yesL
# 2: BSU06940___yesL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 630
# Identity: 617/630 (97.9%)
# Similarity: 617/630 (97.9%)
# Gaps: 6/630 ( 1.0%)
# Score: 3057.0
#
#
#=======================================
BSNT_01179___ 1 ------ATGATACACAGTGTGGCAAATGGGCTGAATCGTTTTTGTACGTG 44
|||||||||||||||||||||||||||||||.||||||||||||
BSU06940___ye 1 ATGTTGATGATACACAGTGTGGCAAATGGGCTGAATCATTTTTGTACGTG 50
BSNT_01179___ 45 GGTGATGAGATTGGCCTATTTGAATGTGCTTTGGATTTTGTTTTCTCTTG 94
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU06940___ye 51 GGTGATGAGACTGGCCTATTTGAATGTGCTTTGGATTTTGTTTTCTCTTG 100
BSNT_01179___ 95 CAGGCCTGGTTGTGTTTGGGCTGATGCCCGCTACTGCCGCGATGTTTACA 144
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU06940___ye 101 CAGGCCTGGTTGTATTTGGGCTGATGCCCGCTACTGCCGCGATGTTTACA 150
BSNT_01179___ 145 GTGGCGAGAGAATGGGCGAAGGGGAATACAGATGCCCCGGTGTTTTCTGT 194
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06940___ye 151 GTGGCGAGAGAATGGGCGAAGGGGAATACAGATGCCCCGGTGTTTTCTGT 200
BSNT_01179___ 195 CTTTTTTCGGACGTTTAAAAAGGAATGGCGGGCATCACAGATCCTCGGGC 244
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06940___ye 201 CTTTTTTCGGACGTTTAAAAAGGAATGGCGGGCATCACAGATCCTCGGGC 250
BSNT_01179___ 245 TTATCGTTGTGACGGCTGCCCTGTTTCTGTTTGCGGATATGCGGATAGCG 294
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06940___ye 251 TTATCGTTGTGACGGCTGCCCTGTTTCTGTTTGCGGATATGCGGATAGCG 300
BSNT_01179___ 295 GCTCAGATGGACCAGCCTGTGCTCGTCAATGTATTCCTGAGCATTAGTTT 344
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU06940___ye 301 GCTCAGATGGACCAGCCTGTGCTCGTCAATGTATTCGTGAGCATTAGTTT 350
BSNT_01179___ 345 GATTTTCGCGTTTGTTGTGCTGTATGTGTTCCCGGTATTTTCTCATTTTG 394
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06940___ye 351 GATTTTCGCGTTTGTTGTGCTGTATGTGTTCCCGGTATTTTCTCATTTTG 400
BSNT_01179___ 395 ACGTAAAAATAAGAGAGGTGCTGAGCATCAGCTTTTTCATTGCCTTCAGC 444
||||||||||.||||||||||||||||||||||||||||||||||||||.
BSU06940___ye 401 ACGTAAAAATCAGAGAGGTGCTGAGCATCAGCTTTTTCATTGCCTTCAGT 450
BSNT_01179___ 445 CGTCCGGCGGTGACGCTTTTGATGGCGGCGGGCGCTGTCGGTGTGCTTTG 494
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU06940___ye 451 CGTCCGGCGGTGACGCTTTTGATGGCAGCGGGCGCTGTCGGTGTGCTTTG 500
BSNT_01179___ 495 TCTCGTTCTGTTTCATGTCACGTTTCTATTGTTTTTCAGCGGGAGTTTAC 544
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06940___ye 501 TCTCGTTCTGTTTCATGTCACGTTTCTATTGTTTTTCAGCGGGAGTTTAC 550
BSNT_01179___ 545 TCAGCCTGATCTTAACGAAGCTGTCCTTTAAAGCGTTTCGGTCAATGGAT 594
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06940___ye 551 TCAGCCTGATCTTAACGAAGCTGTCCTTTAAAGCGTTTCGGTCAATGGAT 600
BSNT_01179___ 595 CAGCGGCAGGAGAAAGAAAAGGCGGCATGA 624
||||||||||||||||||||||||||||||
BSU06940___ye 601 CAGCGGCAGGAGAAAGAAAAGGCGGCATGA 630
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.