Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01178 and BSU06930

See Amino acid alignment / Visit BSNT_01178 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:50
# Commandline: needle
#    -asequence dna-align/BSNT_01178.1.22522.seq
#    -bsequence dna-align/BSU06930___yesK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01178-BSU06930___yesK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01178-BSU06930___yesK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01178
# 2: BSU06930___yesK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     116/303 (38.3%)
# Similarity:   116/303 (38.3%)
# Gaps:         186/303 (61.4%)
# Score: 576.0
# 
#
#=======================================

BSNT_01178         0 --------------------------------------------------      0
                                                                       
BSU06930___ye      1 TTGTCTTTTTCTAAAAGGGAGGCAGGCGATGTGTGGTCAATATTATTTGT     50

BSNT_01178         0 --------------------------------------------------      0
                                                                       
BSU06930___ye     51 GACAGGGATTGTGACGGCTTGTCTGTTTGCTGGCGTATCCGTATTGATGC    100

BSNT_01178         0 --------------------------------------------------      0
                                                                       
BSU06930___ye    101 GGATGAGATTTCCTGACAAAAGTCGGCCGGAATGGATGTTGGCCGGGCTG    150

BSNT_01178         1 ------------------------------------GTGTATGTACGCGG     14
                                                         ||||||||||||||
BSU06930___ye    151 ATCGTCCTTGGTGTGTTTGCGATCTGGTACAGCCTCGTGTATGTACGCGG    200

BSNT_01178        15 CTGGGAAGGGGCTGCGCTCGGAATGCTTGGATTCAATGTCATTTACGGAG     64
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU06930___ye    201 CTGGGAAGGGGCTGCGCTCGGAATGCTTGGATTCAATGTCATTTTCGGAG    250

BSNT_01178        65 CCATTGCCGGATATTTGATCGATAAGGCCATCCGGCGTTACAGGAAAAGA    114
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06930___ye    251 CCATTGCCGGATATTTGATCGATAAGGCCATCCGGCGTTACAGGAAAAGA    300

BSNT_01178       115 TAA    117
                     |||
BSU06930___ye    301 TAA    303


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