Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01178 and BSU06930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:17:50
# Commandline: needle
# -asequence dna-align/BSNT_01178.1.22522.seq
# -bsequence dna-align/BSU06930___yesK.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01178-BSU06930___yesK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01178-BSU06930___yesK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01178
# 2: BSU06930___yesK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity: 116/303 (38.3%)
# Similarity: 116/303 (38.3%)
# Gaps: 186/303 (61.4%)
# Score: 576.0
#
#
#=======================================
BSNT_01178 0 -------------------------------------------------- 0
BSU06930___ye 1 TTGTCTTTTTCTAAAAGGGAGGCAGGCGATGTGTGGTCAATATTATTTGT 50
BSNT_01178 0 -------------------------------------------------- 0
BSU06930___ye 51 GACAGGGATTGTGACGGCTTGTCTGTTTGCTGGCGTATCCGTATTGATGC 100
BSNT_01178 0 -------------------------------------------------- 0
BSU06930___ye 101 GGATGAGATTTCCTGACAAAAGTCGGCCGGAATGGATGTTGGCCGGGCTG 150
BSNT_01178 1 ------------------------------------GTGTATGTACGCGG 14
||||||||||||||
BSU06930___ye 151 ATCGTCCTTGGTGTGTTTGCGATCTGGTACAGCCTCGTGTATGTACGCGG 200
BSNT_01178 15 CTGGGAAGGGGCTGCGCTCGGAATGCTTGGATTCAATGTCATTTACGGAG 64
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU06930___ye 201 CTGGGAAGGGGCTGCGCTCGGAATGCTTGGATTCAATGTCATTTTCGGAG 250
BSNT_01178 65 CCATTGCCGGATATTTGATCGATAAGGCCATCCGGCGTTACAGGAAAAGA 114
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06930___ye 251 CCATTGCCGGATATTTGATCGATAAGGCCATCCGGCGTTACAGGAAAAGA 300
BSNT_01178 115 TAA 117
|||
BSU06930___ye 301 TAA 303
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