Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01172 and BSU06900

See Amino acid alignment / Visit BSNT_01172 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:49
# Commandline: needle
#    -asequence dna-align/BSNT_01172.1.22522.seq
#    -bsequence dna-align/BSU06900___cotJB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01172-BSU06900___cotJB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01172-BSU06900___cotJB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01172
# 2: BSU06900___cotJB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity:     261/264 (98.9%)
# Similarity:   261/264 (98.9%)
# Gaps:           0/264 ( 0.0%)
# Score: 1293.0
# 
#
#=======================================

BSNT_01172         1 ATGGCAAAAAAGGTTGACGCCGAATATTATCGTCAGCTAGAGCAAATACA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06900___co      1 ATGGCAAAAAAGGTTGACGCCGAATATTATCGTCAGCTAGAGCAAATACA     50

BSNT_01172        51 GGCTGCTGATTTTGTGCTTGTTGAGCTGAGTCTTTATTTAAATACACATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06900___co     51 GGCTGCTGATTTTGTGCTTGTTGAGCTGAGTCTTTATTTAAATACACATC    100

BSNT_01172       101 CTCATGATGAGGATGCGCTGAATCAATTCAATCAATATTCCGGCTATTCA    150
                     ||||||||||.||||||.||||.|||||||||||||||||||||||||||
BSU06900___co    101 CTCATGATGAAGATGCGTTGAAGCAATTCAATCAATATTCCGGCTATTCA    150

BSNT_01172       151 AGGCACTTAAAAAGACAGTTCGAATCCTCTTACGGACCGCTTCTGCAGTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06900___co    151 AGGCACTTAAAAAGACAGTTCGAATCCTCTTACGGACCGCTTCTGCAGTT    200

BSNT_01172       201 CGGCAACAGCCCCGCGGGCAAGGATTGGGATTGGGGAAAAGGGCCATGGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06900___co    201 CGGCAACAGCCCCGCGGGCAAGGATTGGGATTGGGGAAAAGGGCCATGGC    250

BSNT_01172       251 CGTGGCAAGTATAA    264
                     ||||||||||||||
BSU06900___co    251 CGTGGCAAGTATAA    264


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