Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01163 and BSU06830

See Amino acid alignment / Visit BSNT_01163 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:17:49
# Commandline: needle
#    -asequence dna-align/BSNT_01163.1.22522.seq
#    -bsequence dna-align/BSU06830___rapH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01163-BSU06830___rapH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01163-BSU06830___rapH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01163
# 2: BSU06830___rapH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1131
# Identity:    1101/1131 (97.3%)
# Similarity:  1101/1131 (97.3%)
# Gaps:           0/1131 ( 0.0%)
# Score: 5385.0
# 
#
#=======================================

BSNT_01163         1 TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATTAATGAATG     50
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU06830___ra      1 TTGAGTCAAGCCATACCGTCTTCGCGTGTTGGTGTTAAGATTAATGAATG     50

BSNT_01163        51 GTACAAGATGATTCGCCAGTTCAGTGTTCCGGATGCTGAGGTTCTGAAAG    100
                     |||.||.|||||||||||||||||||||||||||||||||.|||||||||
BSU06830___ra     51 GTATAAAATGATTCGCCAGTTCAGTGTTCCGGATGCTGAGATTCTGAAAG    100

BSNT_01163       101 CGGAGGTGGAGCAGGACATTCAGAAGATGGAAGAGGATCAGGATTTGCTG    150
                     |||||||.|||||||||||||||.||||||||||.|||||||||||.|||
BSU06830___ra    101 CGGAGGTTGAGCAGGACATTCAGCAGATGGAAGAAGATCAGGATTTACTG    150

BSNT_01163       151 ATCTATTATTCTCTGATGTGTTTTCGGCACCAGCTGATGCTTGATTATTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06830___ra    151 ATCTATTATTCTCTGATGTGTTTTCGGCACCAGCTGATGCTTGATTATTT    200

BSNT_01163       201 GGAGCCGGGACAGCCTTACGGAAATCGTCCTACAGTGACAGAGCTTCTTG    250
                     ||||||||||.|..|.|||||.|||||.||||||||||||||||||||||
BSU06830___ra    201 GGAGCCGGGAAAAACATACGGGAATCGCCCTACAGTGACAGAGCTTCTTG    250

BSNT_01163       251 AAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTAC    300
                     |||||||.||||||||||||||||||||||||||.|||||||||||||||
BSU06830___ra    251 AAACGATCGAGACCCCTCAGAAAAAACTCACAGGTCTTTTGAAATACTAC    300

BSNT_01163       301 TCTTTGTTTTTCCGCGGCATGTATGAATTTGACCAAAAAGAATATGTGGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06830___ra    301 TCTTTGTTTTTCCGCGGCATGTATGAATTTGACCAAAAAGAATATGTGGA    350

BSNT_01163       351 AGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG    400
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU06830___ra    351 AGCGATCGGATATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG    400

BSNT_01163       401 ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTAT    450
                     ||||.||||||||||||||||||||||||||||||||.||||||||||||
BSU06830___ra    401 ATGATATTGAGAAAGCGGAATTCCATTTTAAAGTGGCAGAAGCGTATTAT    450

BSNT_01163       451 CACATGAAGCAAACCCATGTGTCGATGCATCATATTCTTCAAGCCTTAGA    500
                     |||||||||||||||||||||||||||.|||||||||||||||||||.||
BSU06830___ra    451 CACATGAAGCAAACCCATGTGTCGATGTATCATATTCTTCAAGCCTTGGA    500

BSNT_01163       501 CATTTATCAAAACCATCCCTTATACAGCATTAGAACGATACAAAGCTTGT    550
                     ||||||||||||||||||..||||||||||||||||||||||||||||||
BSU06830___ra    501 CATTTATCAAAACCATCCTCTATACAGCATTAGAACGATACAAAGCTTGT    550

BSNT_01163       551 TTGTGATCGCCGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06830___ra    551 TTGTGATCGCCGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTC    600

BSNT_01163       601 CCGCATTTAGAAAAGGCGCTGGAATTGGCCATGGACATTCAAAATGACAG    650
                     |||||||||||...|||||||||||||||.||||||||||||||||||||
BSU06830___ra    601 CCGCATTTAGAGGCGGCGCTGGAATTGGCAATGGACATTCAAAATGACAG    650

BSNT_01163       651 GTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAG    700
                     |||||||||||||||||||||||||||.||.|||||||||||||||||||
BSU06830___ra    651 GTTTATCGCCATTTCTCTATTGAACATTGCAAACAGCTATGACAGATCAG    700

BSNT_01163       701 GAGACGATCAGATGGCTGTAGAACATTTCCAAAAAGCGGCGAAAGTAAGC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06830___ra    701 GAGACGATCAGATGGCTGTAGAACATTTCCAAAAAGCGGCGAAAGTAAGC    750

BSNT_01163       751 AGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06830___ra    751 AGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG    800

BSNT_01163       801 GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06830___ra    801 GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGG    850

BSNT_01163       851 AAGGATTAGACCATATCACAGCACGTTCTCACAAATTTTATAAAGAATTG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06830___ra    851 AAGGATTAGACCATATCACAGCACGTTCTCACAAATTTTATAAAGAATTG    900

BSNT_01163       901 TTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGAAAAAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06830___ra    901 TTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGAAAAAT    950

BSNT_01163       951 TCATGATCTTTTAAGCTATTTCGAAAAAAAGAACCTGCACGCTTACATTG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06830___ra    951 TCATGATCTTTTAAGCTATTTCGAAAAAAAGAACCTGCACGCTTACATTG   1000

BSNT_01163      1001 AAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAGCTGTCACTTT   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU06830___ra   1001 AAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAGCTGTCACTTT   1050

BSNT_01163      1051 GAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATAT   1100
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU06830___ra   1051 GAACAAGCAGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATAT   1100

BSNT_01163      1101 TCTAAAAGGAGAGTGTTTATATGCCTATTAA   1131
                     |||||||||||||||||||||||||||||||
BSU06830___ra   1101 TCTAAAAGGAGAGTGTTTATATGCCTATTAA   1131


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